Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.13■■□□□ 1.13
RTF1Q92541 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.13■■□□□ 1.13
RTF1Q92541 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RTF1Q92541 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTF1Q92541 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTF1Q92541 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTF1Q92541 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTF1Q92541 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTF1Q92541 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RTF1Q92541 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTF1Q92541 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTF1Q92541 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC22.12■■□□□ 1.13
RTF1Q92541 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC22.12■■□□□ 1.13
RTF1Q92541 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RTF1Q92541 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC22.12■■□□□ 1.13
RTF1Q92541 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
RTF1Q92541 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.12■■□□□ 1.13
RTF1Q92541 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC22.12■■□□□ 1.13
RTF1Q92541 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.12■■□□□ 1.13
RTF1Q92541 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.12■■□□□ 1.13
RTF1Q92541 IGHV3OR16-6-201ENST00000568775 360 ntBASIC22.12■■□□□ 1.13
RTF1Q92541 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.12■■□□□ 1.13
RTF1Q92541 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RTF1Q92541 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RTF1Q92541 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC22.12■■□□□ 1.13
RTF1Q92541 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RTF1Q92541 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 RHBDF1P1-201ENST00000427504 1941 ntBASIC22.12■■□□□ 1.13
RTF1Q92541 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTF1Q92541 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC22.11■■□□□ 1.13
RTF1Q92541 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 KRT18P28-201ENST00000453838 1332 ntBASIC22.11■■□□□ 1.13
RTF1Q92541 SLC22A20-204ENST00000530038 1673 ntBASIC22.11■■□□□ 1.13
RTF1Q92541 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
RTF1Q92541 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
RTF1Q92541 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC22.11■■□□□ 1.13
RTF1Q92541 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC22.11■■□□□ 1.13
RTF1Q92541 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.11■■□□□ 1.13
RTF1Q92541 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RTF1Q92541 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.11■■□□□ 1.13
RTF1Q92541 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.11■■□□□ 1.13
RTF1Q92541 AC105339.1-204ENST00000636249 355 ntBASIC22.11■■□□□ 1.13
RTF1Q92541 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
RTF1Q92541 FZD10-202ENST00000539839 3282 ntBASIC22.11■■□□□ 1.13
RTF1Q92541 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 KRT8P49-201ENST00000604166 1432 ntBASIC22.11■■□□□ 1.13
RTF1Q92541 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC22.11■■□□□ 1.13
RTF1Q92541 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC22.11■■□□□ 1.13
RTF1Q92541 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTF1Q92541 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTF1Q92541 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTF1Q92541 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTF1Q92541 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTF1Q92541 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC22.1■■□□□ 1.13
RTF1Q92541 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC22.1■■□□□ 1.13
RTF1Q92541 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
RTF1Q92541 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTF1Q92541 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC22.1■■□□□ 1.13
RTF1Q92541 STOM-202ENST00000347359 870 ntTSL 2 BASIC22.1■■□□□ 1.13
RTF1Q92541 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC22.1■■□□□ 1.13
RTF1Q92541 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTF1Q92541 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC22.1■■□□□ 1.13
RTF1Q92541 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTF1Q92541 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.1■■□□□ 1.13
RTF1Q92541 AC099522.2-201ENST00000607001 744 ntBASIC22.1■■□□□ 1.13
RTF1Q92541 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.1■■□□□ 1.13
RTF1Q92541 AL513210.1-201ENST00000629608 234 ntBASIC22.1■■□□□ 1.13
RTF1Q92541 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
RTF1Q92541 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC22.1■■□□□ 1.13
RTF1Q92541 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC22.1■■□□□ 1.13
RTF1Q92541 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTF1Q92541 AL121761.2-201ENST00000598007 1648 ntBASIC22.09■■□□□ 1.13
RTF1Q92541 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTF1Q92541 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RTF1Q92541 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTF1Q92541 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms