Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 KRT8P49-201ENST00000604166 1432 ntBASIC22.14■■□□□ 1.14
RAPGEF4Q8WZA2 AL021920.2-201ENST00000624828 1351 ntBASIC22.14■■□□□ 1.14
RAPGEF4Q8WZA2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
RAPGEF4Q8WZA2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
RAPGEF4Q8WZA2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RAPGEF4Q8WZA2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 AC241585.1-201ENST00000433527 519 ntBASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 SLC9A3P2-201ENST00000447821 2021 ntBASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RAPGEF4Q8WZA2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 AC142381.1-201ENST00000426099 345 ntBASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAPGEF4Q8WZA2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 FRMD8P1-201ENST00000440433 1524 ntBASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 AC004890.2-204ENST00000481968 304 ntBASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 AC105233.2-201ENST00000523697 349 ntBASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 AF228730.5-201ENST00000530288 346 ntBASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.12■■□□□ 1.13
RAPGEF4Q8WZA2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 CCDC74BP1-201ENST00000508880 1123 ntBASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 RARRES2P9-201ENST00000565168 469 ntBASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 LINC00896-202ENST00000609602 2128 ntBASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 AC018529.1-201ENST00000613063 361 ntBASIC22.11■■□□□ 1.13
RAPGEF4Q8WZA2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms