Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 ELP5-212ENST00000574255 671 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 MIR4515-201ENST00000584082 81 ntBASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SYNE2Q8WXH0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AC120498.5-201ENST00000561757 299 ntBASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AC002472.4-201ENST00000641915 272 ntBASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AC079112.1-201ENST00000454972 939 ntBASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms