Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.14■□□□□ 0.33
BCAS4Q8TDM0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 AC023157.3-201ENST00000619086 2088 ntBASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 AL162430.1-201ENST00000480705 870 ntBASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 AC083880.1-201ENST00000608266 535 ntBASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 AP000692.2-201ENST00000608391 879 ntBASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 AC112497.1-201ENST00000624824 639 ntBASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BCAS4Q8TDM0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 AC104581.4-201ENST00000623126 3052 ntBASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 CICP4-201ENST00000447359 2812 ntBASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 EGFEM1P-202ENST00000431685 1563 ntBASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 MIR663A-201ENST00000385250 93 ntBASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BCAS4Q8TDM0 AC067930.6-201ENST00000623257 4947 ntBASIC17.11■□□□□ 0.33
BCAS4Q8TDM0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BCAS4Q8TDM0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCAS4Q8TDM0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCAS4Q8TDM0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCAS4Q8TDM0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCAS4Q8TDM0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.11■□□□□ 0.33
BCAS4Q8TDM0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
BCAS4Q8TDM0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BCAS4Q8TDM0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms