Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 MRPS18AP1-201ENST00000414458 589 ntBASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 ALG1L8P-201ENST00000533887 760 ntBASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 AC073592.3-201ENST00000625118 1834 ntBASIC16.02■□□□□ 0.16
SNIP1Q8TAD8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNIP1Q8TAD8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNIP1Q8TAD8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNIP1Q8TAD8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
SNIP1Q8TAD8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNIP1Q8TAD8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNIP1Q8TAD8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SNIP1Q8TAD8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNIP1Q8TAD8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.02■□□□□ 0.15
SNIP1Q8TAD8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.02■□□□□ 0.15
SNIP1Q8TAD8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 AC109635.5-201ENST00000533593 962 ntBASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 AL009183.1-201ENST00000603760 355 ntBASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SNIP1Q8TAD8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 AL031598.1-201ENST00000561511 1773 ntBASIC16■□□□□ 0.15
SNIP1Q8TAD8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 AL135999.2-201ENST00000622438 1686 ntBASIC16■□□□□ 0.15
SNIP1Q8TAD8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 AC004233.3-201ENST00000607794 1269 ntBASIC16■□□□□ 0.15
SNIP1Q8TAD8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNIP1Q8TAD8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16■□□□□ 0.15
SNIP1Q8TAD8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms