Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.27■□□□□ 0.35
SYNPOQ8N3V7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SYNPOQ8N3V7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SYNPOQ8N3V7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SYNPOQ8N3V7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SYNPOQ8N3V7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 SPCS2P4-201ENST00000436160 681 ntBASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 RBPMS2P1-201ENST00000437762 623 ntBASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 FAM207CP-201ENST00000443486 507 ntBASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 AC109635.5-201ENST00000533593 962 ntBASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPOQ8N3V7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 REXO1L11P-201ENST00000620964 1927 ntBASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 HMGA1P7-201ENST00000406908 502 ntBASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 AC015922.1-201ENST00000421102 1152 ntBASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 TSPY16P-201ENST00000449843 468 ntBASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 LINC01225-203ENST00000563550 1244 ntBASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPOQ8N3V7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms