Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 OR7E14P-202ENST00000530490 1290 ntBASIC16.45■□□□□ 0.22
KRT78Q8N1N4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 AC107918.4-202ENST00000641623 219 ntBASIC16.45■□□□□ 0.22
KRT78Q8N1N4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 AL021920.2-201ENST00000624828 1351 ntBASIC16.44■□□□□ 0.22
KRT78Q8N1N4 RPS2P28-201ENST00000314255 741 ntBASIC16.44■□□□□ 0.22
KRT78Q8N1N4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 FAM197Y8-203ENST00000450145 560 ntBASIC16.44■□□□□ 0.22
KRT78Q8N1N4 AF186996.4-201ENST00000467186 377 ntBASIC16.44■□□□□ 0.22
KRT78Q8N1N4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 RNPS1P1-201ENST00000507437 918 ntBASIC16.44■□□□□ 0.22
KRT78Q8N1N4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 KRT126P-201ENST00000549467 1181 ntBASIC16.44■□□□□ 0.22
KRT78Q8N1N4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 RN7SL510P-201ENST00000581311 263 ntBASIC16.44■□□□□ 0.22
KRT78Q8N1N4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT78Q8N1N4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.43■□□□□ 0.22
KRT78Q8N1N4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 AC092068.3-201ENST00000587894 2016 ntBASIC16.43■□□□□ 0.22
KRT78Q8N1N4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 AC243591.1-201ENST00000452967 1364 ntBASIC16.43■□□□□ 0.22
KRT78Q8N1N4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 AC022211.2-201ENST00000585075 2527 ntBASIC16.43■□□□□ 0.22
KRT78Q8N1N4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 AP002414.1-201ENST00000391405 1147 ntBASIC16.43■□□□□ 0.22
KRT78Q8N1N4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT78Q8N1N4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms