Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 U1.21-201ENST00000580816 167 ntBASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 AF228730.6-201ENST00000641497 218 ntBASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 AC084121.3-201ENST00000641716 218 ntBASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 AC105233.6-201ENST00000642093 218 ntBASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 SLC22A20-204ENST00000530038 1673 ntBASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 AC068880.1-201ENST00000507289 2297 ntBASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 TSPY16P-201ENST00000449843 468 ntBASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 TERF1P3-201ENST00000505638 1227 ntBASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 RN7SL204P-201ENST00000582831 262 ntBASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 AL031055.1-201ENST00000606362 631 ntBASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 AL390754.1-201ENST00000619088 582 ntBASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NPAS3Q8IXF0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 AC015922.1-201ENST00000421102 1152 ntBASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 AC087641.1-201ENST00000557561 1021 ntBASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 AC091167.2-201ENST00000579581 588 ntBASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 MIR6080-201ENST00000617359 66 ntBASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
NPAS3Q8IXF0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NPAS3Q8IXF0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
NPAS3Q8IXF0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPAS3Q8IXF0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NPAS3Q8IXF0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.52■□□□□ 0.4
NPAS3Q8IXF0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPAS3Q8IXF0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NPAS3Q8IXF0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms