Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 AC105020.1-201ENST00000435356 2205 ntBASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 MIR574-201ENST00000385209 96 ntBASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 MRPL20P1-201ENST00000400819 433 ntBASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 AC034105.1-201ENST00000563488 319 ntBASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 AD000864.1-201ENST00000624076 2295 ntBASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.88■□□□□ 0.45
SCUBE3Q8IX30 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 AL021920.2-201ENST00000624828 1351 ntBASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 AC106886.4-201ENST00000623557 2502 ntBASIC17.87■□□□□ 0.45
SCUBE3Q8IX30 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCUBE3Q8IX30 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms