Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 BICD1-207ENST00000551848 1962 ntBASIC18.36■□□□□ 0.53
HERC6Q8IVU3 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 SPDYE22P-201ENST00000582158 798 ntBASIC18.36■□□□□ 0.53
HERC6Q8IVU3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 AL359881.2-201ENST00000602973 570 ntBASIC18.36■□□□□ 0.53
HERC6Q8IVU3 AL662799.1-202ENST00000614205 422 ntBASIC18.36■□□□□ 0.53
HERC6Q8IVU3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 AC090340.1-201ENST00000620778 4980 ntBASIC18.36■□□□□ 0.53
HERC6Q8IVU3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC6Q8IVU3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 HTR7P1-202ENST00000624664 4411 ntBASIC18.35■□□□□ 0.53
HERC6Q8IVU3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 FZD10-202ENST00000539839 3282 ntBASIC18.35■□□□□ 0.53
HERC6Q8IVU3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 AC012569.1-201ENST00000591191 1524 ntBASIC18.35■□□□□ 0.53
HERC6Q8IVU3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 PIN1P1-201ENST00000412108 996 ntBASIC18.35■□□□□ 0.53
HERC6Q8IVU3 NME2P1-201ENST00000426182 414 ntBASIC18.35■□□□□ 0.53
HERC6Q8IVU3 AC241585.1-201ENST00000433527 519 ntBASIC18.35■□□□□ 0.53
HERC6Q8IVU3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 AC004890.2-204ENST00000481968 304 ntBASIC18.35■□□□□ 0.53
HERC6Q8IVU3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 AC109635.5-201ENST00000533593 962 ntBASIC18.35■□□□□ 0.53
HERC6Q8IVU3 AL596325.1-201ENST00000563991 1082 ntBASIC18.35■□□□□ 0.53
HERC6Q8IVU3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 AL354751.1-201ENST00000412768 1863 ntBASIC18.35■□□□□ 0.53
HERC6Q8IVU3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERC6Q8IVU3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 KRT18P55-202ENST00000578578 1546 ntBASIC18.34■□□□□ 0.53
HERC6Q8IVU3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.34■□□□□ 0.53
HERC6Q8IVU3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.34■□□□□ 0.53
HERC6Q8IVU3 ABALON-201ENST00000629058 1903 ntBASIC18.34■□□□□ 0.53
HERC6Q8IVU3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 AL139327.4-201ENST00000612362 153 ntBASIC18.34■□□□□ 0.53
HERC6Q8IVU3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms