Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM50Q86XT4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 AC093520.2-201ENST00000561830 333 ntBASIC18.93■□□□□ 0.62
TRIM50Q86XT4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM50Q86XT4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 AL138688.1-201ENST00000624851 1594 ntBASIC18.92■□□□□ 0.62
TRIM50Q86XT4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 AC116353.5-201ENST00000638148 1699 ntBASIC18.92■□□□□ 0.62
TRIM50Q86XT4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM50Q86XT4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 AL645939.2-201ENST00000427340 991 ntBASIC18.91■□□□□ 0.62
TRIM50Q86XT4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 AC005412.3-201ENST00000580309 715 ntBASIC18.91■□□□□ 0.62
TRIM50Q86XT4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 NOC2LP2-201ENST00000407594 1944 ntBASIC18.91■□□□□ 0.62
TRIM50Q86XT4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 SLC22A20-204ENST00000530038 1673 ntBASIC18.91■□□□□ 0.62
TRIM50Q86XT4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 CROCCP2-202ENST00000412962 2773 ntBASIC18.91■□□□□ 0.62
TRIM50Q86XT4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
TRIM50Q86XT4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM50Q86XT4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms