Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 PAWRP1-201ENST00000451083 565 ntBASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 AF238378.1-201ENST00000526806 358 ntBASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 AC139887.3-201ENST00000568585 713 ntBASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 AC012313.10-201ENST00000623509 926 ntBASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 AC079328.2-201ENST00000561241 3354 ntBASIC21■□□□□ 0.95
CHD1LQ86WJ1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21■□□□□ 0.95
CHD1LQ86WJ1 AC025062.2-201ENST00000605477 670 ntBASIC21■□□□□ 0.95
CHD1LQ86WJ1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 AC018695.7-201ENST00000624587 2492 ntBASIC21■□□□□ 0.95
CHD1LQ86WJ1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD1LQ86WJ1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CHD1LQ86WJ1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 AC021087.4-201ENST00000563761 564 ntBASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 AC006449.5-201ENST00000610658 2098 ntBASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.99■□□□□ 0.95
CHD1LQ86WJ1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 AC006277.1-201ENST00000624348 1610 ntBASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 SAPCD2P3-201ENST00000455031 850 ntBASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms