Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 OR6D1P-203ENST00000641209 4860 ntBASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 AC108860.2-201ENST00000562760 2183 ntBASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 KRT19P2-202ENST00000557173 1012 ntBASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 AL513190.1-201ENST00000621254 727 ntBASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 AC092865.6-201ENST00000642101 219 ntBASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 AC025580.3-201ENST00000617932 1424 ntBASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 TUBB7P-202ENST00000428444 1305 ntBASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.67■□□□□ 0.26
LRRTM4Q86VH4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 PDPK2P-202ENST00000562415 1191 ntBASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 KRT8P49-201ENST00000604166 1432 ntBASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM4Q86VH4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms