Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17■□□□□ 0.31
LDB1Q86U70 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17■□□□□ 0.31
LDB1Q86U70 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LDB1Q86U70 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17■□□□□ 0.31
LDB1Q86U70 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17■□□□□ 0.31
LDB1Q86U70 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17■□□□□ 0.31
LDB1Q86U70 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
LDB1Q86U70 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17■□□□□ 0.31
LDB1Q86U70 DUX4L17-201ENST00000557360 1267 ntBASIC17■□□□□ 0.31
LDB1Q86U70 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17■□□□□ 0.31
LDB1Q86U70 AL139424.1-201ENST00000607572 797 ntBASIC17■□□□□ 0.31
LDB1Q86U70 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17■□□□□ 0.31
LDB1Q86U70 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17■□□□□ 0.31
LDB1Q86U70 AL589182.2-201ENST00000619332 1049 ntBASIC17■□□□□ 0.31
LDB1Q86U70 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17■□□□□ 0.31
LDB1Q86U70 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LDB1Q86U70 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17■□□□□ 0.31
LDB1Q86U70 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17■□□□□ 0.31
LDB1Q86U70 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17■□□□□ 0.31
LDB1Q86U70 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
LDB1Q86U70 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LDB1Q86U70 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
LDB1Q86U70 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LDB1Q86U70 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LDB1Q86U70 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LDB1Q86U70 AL645728.1-201ENST00000366221 2101 ntBASIC16.99■□□□□ 0.31
LDB1Q86U70 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LDB1Q86U70 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
LDB1Q86U70 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.99■□□□□ 0.31
LDB1Q86U70 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.99■□□□□ 0.31
LDB1Q86U70 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 RPS2P1-201ENST00000434010 821 ntBASIC16.99■□□□□ 0.31
LDB1Q86U70 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.99■□□□□ 0.31
LDB1Q86U70 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.99■□□□□ 0.31
LDB1Q86U70 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.99■□□□□ 0.31
LDB1Q86U70 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LDB1Q86U70 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.99■□□□□ 0.31
LDB1Q86U70 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.99■□□□□ 0.31
LDB1Q86U70 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.99■□□□□ 0.31
LDB1Q86U70 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.99■□□□□ 0.31
LDB1Q86U70 AC139887.3-201ENST00000568585 713 ntBASIC16.99■□□□□ 0.31
LDB1Q86U70 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.99■□□□□ 0.31
LDB1Q86U70 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.99■□□□□ 0.31
LDB1Q86U70 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.99■□□□□ 0.31
LDB1Q86U70 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.99■□□□□ 0.31
LDB1Q86U70 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LDB1Q86U70 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LDB1Q86U70 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.99■□□□□ 0.31
LDB1Q86U70 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.99■□□□□ 0.31
LDB1Q86U70 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB1Q86U70 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.98■□□□□ 0.31
LDB1Q86U70 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LDB1Q86U70 AC006504.4-201ENST00000592118 1568 ntBASIC16.98■□□□□ 0.31
LDB1Q86U70 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB1Q86U70 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB1Q86U70 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB1Q86U70 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB1Q86U70 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.98■□□□□ 0.31
LDB1Q86U70 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB1Q86U70 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.98■□□□□ 0.31
LDB1Q86U70 AP002414.1-201ENST00000391405 1147 ntBASIC16.98■□□□□ 0.31
LDB1Q86U70 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.98■□□□□ 0.31
LDB1Q86U70 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
LDB1Q86U70 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.98■□□□□ 0.31
LDB1Q86U70 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LDB1Q86U70 AC079781.3-201ENST00000449110 356 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms