Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 FRMD8P1-201ENST00000440433 1524 ntBASIC16.32■□□□□ 0.2
RNF44Q7L0R7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 AC124947.2-201ENST00000547118 1133 ntBASIC16.32■□□□□ 0.2
RNF44Q7L0R7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 AC002310.6-201ENST00000624451 1377 ntBASIC16.32■□□□□ 0.2
RNF44Q7L0R7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF44Q7L0R7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 IGLL3P-201ENST00000412472 434 ntBASIC16.31■□□□□ 0.2
RNF44Q7L0R7 AC007967.2-201ENST00000432613 625 ntBASIC16.31■□□□□ 0.2
RNF44Q7L0R7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF44Q7L0R7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 KRT18P3-201ENST00000451602 1288 ntBASIC16.3■□□□□ 0.2
RNF44Q7L0R7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 RNA5SP416-201ENST00000516838 111 ntBASIC16.3■□□□□ 0.2
RNF44Q7L0R7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 DUX4L17-201ENST00000557360 1267 ntBASIC16.3■□□□□ 0.2
RNF44Q7L0R7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF44Q7L0R7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms