Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 MIR4751-201ENST00000578027 74 ntBASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 PI4KAP1-204ENST00000612579 1703 ntBASIC17.77■□□□□ 0.44
RFWD3Q6PCD5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD3Q6PCD5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 AL138688.1-201ENST00000624851 1594 ntBASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 AP002414.1-201ENST00000391405 1147 ntBASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
RFWD3Q6PCD5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 KRT18P3-201ENST00000451602 1288 ntBASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 FAM197Y3-203ENST00000618346 717 ntBASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 PCDHB19P-201ENST00000570871 2371 ntBASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD3Q6PCD5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 CROCCP2-202ENST00000412962 2773 ntBASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 PMS2P7-201ENST00000506558 1336 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms