Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 AC016396.2-201ENST00000562575 1417 ntBASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 TP53TG3HP-202ENST00000569755 579 ntBASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 AC087499.5-201ENST00000452760 1342 ntBASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 FOXO1B-201ENST00000504678 1527 ntBASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNKSR3Q6P9H4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 SLC25A1P3-201ENST00000395415 828 ntBASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 TEX28P1-201ENST00000613479 1221 ntBASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 TEX28P2-201ENST00000617764 1221 ntBASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNKSR3Q6P9H4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 CETN4P-206ENST00000642099 2168 ntBASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 AC009407.1-201ENST00000568958 598 ntBASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 AC008738.7-201ENST00000609744 511 ntBASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms