Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 TFAMP1-201ENST00000412727 736 ntBASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 DUX4L17-201ENST00000557360 1267 ntBASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 AC009093.7-201ENST00000623853 1223 ntBASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 LINC00628-201ENST00000628516 1289 ntBASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 AC012569.1-201ENST00000591191 1524 ntBASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 AC020916.1-201ENST00000587762 1774 ntBASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CCDC62Q6P9F0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 MIR770-201ENST00000390219 98 ntBASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 SPDYE11-202ENST00000450699 704 ntBASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 AC079140.1-201ENST00000508039 487 ntBASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 SPDYE9P-201ENST00000570642 692 ntBASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 AL009183.1-201ENST00000603760 355 ntBASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 SPDYE10P-202ENST00000612005 668 ntBASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 SPDYE8P-202ENST00000612377 668 ntBASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 AL353732.1-201ENST00000569618 1459 ntBASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC62Q6P9F0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 AKAP8P1-201ENST00000434743 1349 ntBASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 AC025678.2-201ENST00000562061 970 ntBASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 RARRES2P8-201ENST00000566335 367 ntBASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC62Q6P9F0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms