Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PPP4R3AQ6IN85 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PPP4R3AQ6IN85 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PPP4R3AQ6IN85 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PPP4R3AQ6IN85 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPP4R3AQ6IN85 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 AC092068.3-201ENST00000587894 2016 ntBASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 AC034105.1-201ENST00000563488 319 ntBASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 AC010654.1-201ENST00000615722 808 ntBASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 REXO1L3P-201ENST00000622202 1288 ntBASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 AC099398.1-201ENST00000567919 2776 ntBASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
PPP4R3AQ6IN85 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 AC120114.3-201ENST00000611923 658 ntBASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 AC104109.2-201ENST00000602919 1418 ntBASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R3AQ6IN85 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 SLC25A1P1-201ENST00000528351 927 ntBASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 AC106730.1-201ENST00000566722 1090 ntBASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP4R3AQ6IN85 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms