Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 NUS1P2-201ENST00000417358 873 ntBASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 AL732292.2-201ENST00000609649 430 ntBASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 INTS4P1-201ENST00000438455 1935 ntBASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 AC010460.3-201ENST00000511359 1579 ntBASIC17.36■□□□□ 0.37
CAPRIN2Q6IMN6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 AC004870.1-201ENST00000315132 882 ntBASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 UNC93B7-201ENST00000509439 705 ntBASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 AL662844.4-201ENST00000606367 2838 ntBASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPRIN2Q6IMN6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 COX5BP2-201ENST00000392354 334 ntBASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 AGGF1P2-201ENST00000426656 2106 ntBASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 DDX43P3-201ENST00000441064 443 ntBASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 AC111152.3-201ENST00000569699 673 ntBASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPRIN2Q6IMN6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms