Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 MAX-210ENST00000555419 765 ntTSL 5 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 AC104989.1-201ENST00000519711 778 ntBASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
SNAPC4Q5SXM2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 TMEM261P1-201ENST00000604899 340 ntBASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SNAPC4Q5SXM2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 HAUS4P1-201ENST00000406739 1145 ntBASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 MIR6869-201ENST00000619434 62 ntBASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 AC004461.2-201ENST00000629517 803 ntBASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNAPC4Q5SXM2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 AC099548.2-209ENST00000480264 625 ntBASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 CD74-212ENST00000524315 584 ntTSL 5 BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 AC093726.1-201ENST00000608064 963 ntBASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 AC090164.3-201ENST00000610780 2143 ntBASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SNAPC4Q5SXM2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC27.33■■□□□ 1.96
SNAPC4Q5SXM2 BOLA2P3-201ENST00000404566 256 ntBASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms