Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI3KQ59H18 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.69■□□□□ 0.9
TNNI3KQ59H18 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.69■□□□□ 0.9
TNNI3KQ59H18 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNNI3KQ59H18 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TNNI3KQ59H18 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.69■□□□□ 0.9
TNNI3KQ59H18 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 AC005915.1-201ENST00000624912 2018 ntBASIC20.68■□□□□ 0.9
TNNI3KQ59H18 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 UPF3AP3-201ENST00000420996 769 ntBASIC20.68■□□□□ 0.9
TNNI3KQ59H18 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 AP002472.1-201ENST00000577490 586 ntBASIC20.68■□□□□ 0.9
TNNI3KQ59H18 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.68■□□□□ 0.9
TNNI3KQ59H18 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 AL645728.1-201ENST00000366221 2101 ntBASIC20.67■□□□□ 0.9
TNNI3KQ59H18 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 AC087641.1-201ENST00000557561 1021 ntBASIC20.67■□□□□ 0.9
TNNI3KQ59H18 AL078644.1-201ENST00000609881 752 ntBASIC20.67■□□□□ 0.9
TNNI3KQ59H18 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.67■□□□□ 0.9
TNNI3KQ59H18 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNNI3KQ59H18 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 AC105020.1-201ENST00000435356 2205 ntBASIC20.66■□□□□ 0.9
TNNI3KQ59H18 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 CYP2A7P1-201ENST00000595391 815 ntBASIC20.66■□□□□ 0.9
TNNI3KQ59H18 AC013467.2-201ENST00000605472 835 ntBASIC20.66■□□□□ 0.9
TNNI3KQ59H18 C20orf181-201ENST00000623918 480 ntBASIC20.66■□□□□ 0.9
TNNI3KQ59H18 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 AC006277.1-201ENST00000624348 1610 ntBASIC20.66■□□□□ 0.9
TNNI3KQ59H18 LINC00895-201ENST00000629028 1637 ntBASIC20.66■□□□□ 0.9
TNNI3KQ59H18 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
TNNI3KQ59H18 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms