Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.89■□□□□ 0.46
PTPN20Q4JDL3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.89■□□□□ 0.46
PTPN20Q4JDL3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
PTPN20Q4JDL3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 AC107918.2-201ENST00000530817 355 ntBASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 GGTLC5P-201ENST00000617623 998 ntBASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 PGM5P2-202ENST00000637225 1043 ntBASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN20Q4JDL3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 AC092171.3-201ENST00000610122 2651 ntBASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 OR7E47P-204ENST00000575924 449 ntBASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 AC084018.2-201ENST00000613093 2607 ntBASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 TOP3BP1-201ENST00000420768 1380 ntBASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN20Q4JDL3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 AL603756.1-201ENST00000606511 2163 ntBASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN20Q4JDL3 FDX1P1-201ENST00000449115 551 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms