Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCGF3Q3KNV8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCGF3Q3KNV8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PCGF3Q3KNV8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCGF3Q3KNV8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCGF3Q3KNV8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCGF3Q3KNV8 LINC02199-201ENST00000506655 2702 ntBASIC15.15■□□□□ 0.02
PCGF3Q3KNV8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCGF3Q3KNV8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 AC011467.2-201ENST00000598425 242 ntBASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCGF3Q3KNV8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 REXO1L11P-201ENST00000620964 1927 ntBASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 FAM220CP-201ENST00000395253 831 ntBASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 AC096633.1-201ENST00000422446 749 ntBASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCGF3Q3KNV8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms