Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 LINC00895-201ENST00000629028 1637 ntBASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 FRMD8P1-201ENST00000440433 1524 ntBASIC18.44■□□□□ 0.54
TRIM71Q2Q1W2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 MRPS18AP1-201ENST00000414458 589 ntBASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 AC005034.1-201ENST00000426657 489 ntBASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 AC004890.2-204ENST00000481968 304 ntBASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 AC005225.4-201ENST00000557330 545 ntBASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 AC012645.4-201ENST00000610691 1061 ntBASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM71Q2Q1W2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 CYP2A7P1-201ENST00000595391 815 ntBASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 AP001350.2-201ENST00000625104 1094 ntBASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM71Q2Q1W2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 LINC00896-202ENST00000609602 2128 ntBASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 KRT8P49-201ENST00000604166 1432 ntBASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 AC116353.5-201ENST00000638148 1699 ntBASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 TSSK5P-201ENST00000423978 907 ntBASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 AC244107.1-201ENST00000442033 332 ntBASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 AC073389.1-201ENST00000595595 795 ntBASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms