Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 RN7SL828P-201ENST00000607615 303 ntBASIC20.92■□□□□ 0.94
DDR1Q08345 AL589739.1-201ENST00000607720 493 ntBASIC20.92■□□□□ 0.94
DDR1Q08345 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
DDR1Q08345 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.92■□□□□ 0.94
DDR1Q08345 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.92■□□□□ 0.94
DDR1Q08345 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.92■□□□□ 0.94
DDR1Q08345 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDR1Q08345 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDR1Q08345 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.92■□□□□ 0.94
DDR1Q08345 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDR1Q08345 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDR1Q08345 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDR1Q08345 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDR1Q08345 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDR1Q08345 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.91■□□□□ 0.94
DDR1Q08345 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDR1Q08345 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDR1Q08345 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.91■□□□□ 0.94
DDR1Q08345 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
DDR1Q08345 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.91■□□□□ 0.94
DDR1Q08345 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDR1Q08345 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.91■□□□□ 0.94
DDR1Q08345 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDR1Q08345 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDR1Q08345 AL080243.2-201ENST00000418783 582 ntBASIC20.91■□□□□ 0.94
DDR1Q08345 ACA64.2-201ENST00000459014 129 ntBASIC20.91■□□□□ 0.94
DDR1Q08345 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDR1Q08345 TNXA-203ENST00000507684 2038 ntBASIC20.91■□□□□ 0.94
DDR1Q08345 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDR1Q08345 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.91■□□□□ 0.94
DDR1Q08345 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.91■□□□□ 0.94
DDR1Q08345 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.91■□□□□ 0.94
DDR1Q08345 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.91■□□□□ 0.94
DDR1Q08345 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.91■□□□□ 0.94
DDR1Q08345 CHCHD2P3-201ENST00000603038 451 ntBASIC20.91■□□□□ 0.94
DDR1Q08345 AL133215.2-201ENST00000609242 977 ntBASIC20.91■□□□□ 0.94
DDR1Q08345 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.91■□□□□ 0.94
DDR1Q08345 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDR1Q08345 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DDR1Q08345 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.9■□□□□ 0.94
DDR1Q08345 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.9■□□□□ 0.94
DDR1Q08345 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
DDR1Q08345 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.9■□□□□ 0.94
DDR1Q08345 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.9■□□□□ 0.94
DDR1Q08345 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.9■□□□□ 0.94
DDR1Q08345 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.9■□□□□ 0.94
DDR1Q08345 AL353705.2-201ENST00000428243 662 ntBASIC20.9■□□□□ 0.94
DDR1Q08345 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.9■□□□□ 0.94
DDR1Q08345 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.9■□□□□ 0.94
DDR1Q08345 AC135586.1-201ENST00000539323 574 ntBASIC20.9■□□□□ 0.94
DDR1Q08345 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.9■□□□□ 0.94
DDR1Q08345 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.9■□□□□ 0.94
DDR1Q08345 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.9■□□□□ 0.94
DDR1Q08345 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.9■□□□□ 0.94
DDR1Q08345 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
DDR1Q08345 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.9■□□□□ 0.94
DDR1Q08345 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDR1Q08345 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.9■□□□□ 0.94
DDR1Q08345 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDR1Q08345 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.89■□□□□ 0.94
DDR1Q08345 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDR1Q08345 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.89■□□□□ 0.93
DDR1Q08345 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDR1Q08345 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDR1Q08345 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.89■□□□□ 0.93
DDR1Q08345 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDR1Q08345 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDR1Q08345 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDR1Q08345 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
DDR1Q08345 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDR1Q08345 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.89■□□□□ 0.93
DDR1Q08345 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.89■□□□□ 0.93
DDR1Q08345 AL512384.1-201ENST00000406683 331 ntBASIC20.89■□□□□ 0.93
DDR1Q08345 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.89■□□□□ 0.93
DDR1Q08345 DFFBP1-201ENST00000433250 979 ntBASIC20.89■□□□□ 0.93
DDR1Q08345 RPS2P32-201ENST00000439199 892 ntBASIC20.89■□□□□ 0.93
DDR1Q08345 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.89■□□□□ 0.93
DDR1Q08345 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDR1Q08345 AC017083.2-201ENST00000608069 979 ntBASIC20.89■□□□□ 0.93
DDR1Q08345 AL162274.1-201ENST00000617191 1098 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms