Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 PCDHA14-201ENST00000506751 2298 ntBASIC13.1□□□□□ -0.31
HIST1H1AQ02539 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 AC011840.4-201ENST00000578471 627 ntBASIC13.1□□□□□ -0.31
HIST1H1AQ02539 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H1AQ02539 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 MYCLP1-201ENST00000372451 1075 ntBASIC13.09□□□□□ -0.31
HIST1H1AQ02539 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 COX5BP2-201ENST00000392354 334 ntBASIC13.09□□□□□ -0.31
HIST1H1AQ02539 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 AC090616.6-201ENST00000582640 721 ntBASIC13.09□□□□□ -0.31
HIST1H1AQ02539 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 AC011498.5-201ENST00000592027 486 ntBASIC13.09□□□□□ -0.31
HIST1H1AQ02539 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.09□□□□□ -0.31
HIST1H1AQ02539 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.09□□□□□ -0.31
HIST1H1AQ02539 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms