Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 KRT8P32-201ENST00000512863 1461 ntBASIC14.78□□□□□ -0.04
UBA52P62987 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.78□□□□□ -0.04
UBA52P62987 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.78□□□□□ -0.04
UBA52P62987 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.78□□□□□ -0.04
UBA52P62987 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UBA52P62987 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.78□□□□□ -0.04
UBA52P62987 KRT16P4-201ENST00000453883 522 ntBASIC14.78□□□□□ -0.04
UBA52P62987 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.78□□□□□ -0.04
UBA52P62987 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 MIR3180-4-201ENST00000582223 153 ntBASIC14.78□□□□□ -0.04
UBA52P62987 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
UBA52P62987 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.78□□□□□ -0.04
UBA52P62987 AC004263.2-201ENST00000617183 678 ntBASIC14.78□□□□□ -0.04
UBA52P62987 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.78□□□□□ -0.04
UBA52P62987 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.78□□□□□ -0.04
UBA52P62987 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UBA52P62987 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
UBA52P62987 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.78□□□□□ -0.04
UBA52P62987 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UBA52P62987 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.78□□□□□ -0.04
UBA52P62987 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
UBA52P62987 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBA52P62987 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBA52P62987 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
UBA52P62987 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBA52P62987 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
UBA52P62987 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.77□□□□□ -0.04
UBA52P62987 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBA52P62987 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
UBA52P62987 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBA52P62987 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBA52P62987 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.77□□□□□ -0.04
UBA52P62987 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.77□□□□□ -0.05
UBA52P62987 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
UBA52P62987 VENTXP7-201ENST00000475503 772 ntBASIC14.77□□□□□ -0.05
UBA52P62987 GUSBP12-201ENST00000513727 720 ntBASIC14.77□□□□□ -0.05
UBA52P62987 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.77□□□□□ -0.05
UBA52P62987 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
UBA52P62987 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.77□□□□□ -0.05
UBA52P62987 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 AL592071.1-201ENST00000611956 408 ntBASIC14.77□□□□□ -0.05
UBA52P62987 AC006538.3-201ENST00000612495 578 ntBASIC14.77□□□□□ -0.05
UBA52P62987 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.77□□□□□ -0.05
UBA52P62987 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UBA52P62987 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.77□□□□□ -0.05
UBA52P62987 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.77□□□□□ -0.05
UBA52P62987 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBA52P62987 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
UBA52P62987 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UBA52P62987 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
UBA52P62987 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 AC068587.6-202ENST00000641839 5619 ntBASIC14.76□□□□□ -0.05
UBA52P62987 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 IGHGP-201ENST00000390555 1178 ntBASIC14.76□□□□□ -0.05
UBA52P62987 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UBA52P62987 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
UBA52P62987 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.76□□□□□ -0.05
UBA52P62987 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
UBA52P62987 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.76□□□□□ -0.05
UBA52P62987 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.76□□□□□ -0.05
UBA52P62987 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.76□□□□□ -0.05
UBA52P62987 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 AC034236.2-201ENST00000606662 1610 ntBASIC14.76□□□□□ -0.05
UBA52P62987 AL513523.2-202ENST00000427283 2040 ntBASIC14.76□□□□□ -0.05
UBA52P62987 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.76□□□□□ -0.05
UBA52P62987 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBA52P62987 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms