Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN2P57739 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN2P57739 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLDN2P57739 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN2P57739 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN2P57739 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLDN2P57739 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN2P57739 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN2P57739 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN2P57739 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.75■□□□□ 0.27
CLDN2P57739 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN2P57739 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLDN2P57739 AC116353.5-201ENST00000638148 1699 ntBASIC16.75■□□□□ 0.27
CLDN2P57739 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN2P57739 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN2P57739 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN2P57739 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN2P57739 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CLDN2P57739 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CLDN2P57739 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CLDN2P57739 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CLDN2P57739 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN2P57739 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN2P57739 SPDYE11-202ENST00000450699 704 ntBASIC16.74■□□□□ 0.27
CLDN2P57739 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CLDN2P57739 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN2P57739 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CLDN2P57739 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN2P57739 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.74■□□□□ 0.27
CLDN2P57739 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN2P57739 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN2P57739 AC093520.2-201ENST00000561830 333 ntBASIC16.74■□□□□ 0.27
CLDN2P57739 SPDYE9P-201ENST00000570642 692 ntBASIC16.74■□□□□ 0.27
CLDN2P57739 SPDYE10P-202ENST00000612005 668 ntBASIC16.74■□□□□ 0.27
CLDN2P57739 SPDYE8P-202ENST00000612377 668 ntBASIC16.74■□□□□ 0.27
CLDN2P57739 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 SLC22A20-204ENST00000530038 1673 ntBASIC16.74■□□□□ 0.27
CLDN2P57739 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN2P57739 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN2P57739 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CLDN2P57739 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN2P57739 AL353732.1-201ENST00000569618 1459 ntBASIC16.73■□□□□ 0.27
CLDN2P57739 CROCCP2-202ENST00000412962 2773 ntBASIC16.73■□□□□ 0.27
CLDN2P57739 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CLDN2P57739 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CLDN2P57739 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CLDN2P57739 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CLDN2P57739 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN2P57739 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN2P57739 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN2P57739 TFAMP1-201ENST00000412727 736 ntBASIC16.73■□□□□ 0.27
CLDN2P57739 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN2P57739 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms