Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB38P57729 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB38P57729 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RAB38P57729 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RAB38P57729 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.98■□□□□ 0.15
RAB38P57729 CXCL1P1-201ENST00000502804 216 ntBASIC15.98■□□□□ 0.15
RAB38P57729 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RAB38P57729 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.98■□□□□ 0.15
RAB38P57729 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB38P57729 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB38P57729 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.98■□□□□ 0.15
RAB38P57729 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB38P57729 AP002490.2-201ENST00000524791 560 ntBASIC15.98■□□□□ 0.15
RAB38P57729 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB38P57729 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.98■□□□□ 0.15
RAB38P57729 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RAB38P57729 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.98■□□□□ 0.15
RAB38P57729 AC064836.3-201ENST00000607928 673 ntBASIC15.98■□□□□ 0.15
RAB38P57729 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB38P57729 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
RAB38P57729 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB38P57729 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB38P57729 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RAB38P57729 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB38P57729 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RAB38P57729 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAB38P57729 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB38P57729 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB38P57729 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB38P57729 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB38P57729 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB38P57729 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.97■□□□□ 0.15
RAB38P57729 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB38P57729 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
RAB38P57729 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB38P57729 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 IGLL3P-201ENST00000412472 434 ntBASIC15.97■□□□□ 0.15
RAB38P57729 AC007967.2-201ENST00000432613 625 ntBASIC15.97■□□□□ 0.15
RAB38P57729 AL591424.1-201ENST00000442569 1213 ntBASIC15.97■□□□□ 0.15
RAB38P57729 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.97■□□□□ 0.15
RAB38P57729 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB38P57729 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB38P57729 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB38P57729 AC091167.2-201ENST00000579581 588 ntBASIC15.97■□□□□ 0.15
RAB38P57729 AC005412.3-201ENST00000580309 715 ntBASIC15.97■□□□□ 0.15
RAB38P57729 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB38P57729 AC027601.4-201ENST00000611259 610 ntBASIC15.97■□□□□ 0.15
RAB38P57729 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB38P57729 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAB38P57729 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAB38P57729 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB38P57729 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB38P57729 AC012313.1-201ENST00000593393 3059 ntBASIC15.97■□□□□ 0.15
RAB38P57729 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB38P57729 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB38P57729 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB38P57729 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RAB38P57729 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB38P57729 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RAB38P57729 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.96■□□□□ 0.15
RAB38P57729 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RAB38P57729 MED15P5-201ENST00000423150 992 ntBASIC15.96■□□□□ 0.15
RAB38P57729 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 FAM185BP-201ENST00000443595 716 ntBASIC15.96■□□□□ 0.15
RAB38P57729 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.96■□□□□ 0.15
RAB38P57729 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB38P57729 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RAB38P57729 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB38P57729 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RAB38P57729 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB38P57729 AC140113.2-201ENST00000604370 208 ntBASIC15.96■□□□□ 0.15
RAB38P57729 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.96■□□□□ 0.15
RAB38P57729 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB38P57729 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RAB38P57729 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB38P57729 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms