Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHA4P54764 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.35■□□□□ 0.21
EPHA4P54764 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EPHA4P54764 ADH5P3-201ENST00000433842 1137 ntBASIC16.35■□□□□ 0.21
EPHA4P54764 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHA4P54764 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.35■□□□□ 0.21
EPHA4P54764 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.35■□□□□ 0.21
EPHA4P54764 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.35■□□□□ 0.21
EPHA4P54764 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
EPHA4P54764 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.35■□□□□ 0.21
EPHA4P54764 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.35■□□□□ 0.21
EPHA4P54764 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
EPHA4P54764 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHA4P54764 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
EPHA4P54764 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHA4P54764 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHA4P54764 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.35■□□□□ 0.21
EPHA4P54764 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
EPHA4P54764 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.35■□□□□ 0.21
EPHA4P54764 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
EPHA4P54764 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
EPHA4P54764 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
EPHA4P54764 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.35■□□□□ 0.21
EPHA4P54764 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
EPHA4P54764 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EPHA4P54764 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.34■□□□□ 0.21
EPHA4P54764 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
EPHA4P54764 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHA4P54764 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
EPHA4P54764 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
EPHA4P54764 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
EPHA4P54764 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.34■□□□□ 0.21
EPHA4P54764 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
EPHA4P54764 AL355306.1-201ENST00000415580 579 ntBASIC16.34■□□□□ 0.21
EPHA4P54764 METTL21AP1-201ENST00000438852 635 ntBASIC16.34■□□□□ 0.21
EPHA4P54764 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHA4P54764 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHA4P54764 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHA4P54764 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
EPHA4P54764 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.34■□□□□ 0.21
EPHA4P54764 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.34■□□□□ 0.21
EPHA4P54764 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.34■□□□□ 0.21
EPHA4P54764 AL589935.2-201ENST00000616471 1231 ntBASIC16.34■□□□□ 0.21
EPHA4P54764 AL161645.1-201ENST00000622716 1255 ntBASIC16.34■□□□□ 0.21
EPHA4P54764 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.34■□□□□ 0.21
EPHA4P54764 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHA4P54764 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
EPHA4P54764 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 AL021920.2-201ENST00000624828 1351 ntBASIC16.34■□□□□ 0.21
EPHA4P54764 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
EPHA4P54764 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHA4P54764 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
EPHA4P54764 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHA4P54764 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA4P54764 OR6D1P-202ENST00000641007 5290 ntBASIC16.33■□□□□ 0.21
EPHA4P54764 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA4P54764 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.33■□□□□ 0.21
EPHA4P54764 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA4P54764 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA4P54764 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.33■□□□□ 0.21
EPHA4P54764 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHA4P54764 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
EPHA4P54764 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.33■□□□□ 0.2
EPHA4P54764 HMGA1P7-201ENST00000406908 502 ntBASIC16.33■□□□□ 0.2
EPHA4P54764 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHA4P54764 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
EPHA4P54764 RN7SL589P-201ENST00000481268 310 ntBASIC16.33■□□□□ 0.2
EPHA4P54764 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.33■□□□□ 0.2
EPHA4P54764 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHA4P54764 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.33■□□□□ 0.2
EPHA4P54764 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.33■□□□□ 0.2
EPHA4P54764 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.33■□□□□ 0.2
EPHA4P54764 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 AC099522.2-201ENST00000607001 744 ntBASIC16.33■□□□□ 0.2
EPHA4P54764 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.33■□□□□ 0.2
EPHA4P54764 AP001350.2-201ENST00000625104 1094 ntBASIC16.33■□□□□ 0.2
EPHA4P54764 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms