Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.73■□□□□ 0.59
PMS1P54277 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.73■□□□□ 0.59
PMS1P54277 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.73■□□□□ 0.59
PMS1P54277 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PMS1P54277 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 ALOX12P2-203ENST00000570921 1945 ntBASIC18.72■□□□□ 0.59
PMS1P54277 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PMS1P54277 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PMS1P54277 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.72■□□□□ 0.59
PMS1P54277 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PMS1P54277 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.72■□□□□ 0.59
PMS1P54277 AC008608.2-201ENST00000606089 416 ntBASIC18.72■□□□□ 0.59
PMS1P54277 AL139424.1-201ENST00000607572 797 ntBASIC18.72■□□□□ 0.59
PMS1P54277 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.72■□□□□ 0.59
PMS1P54277 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PMS1P54277 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.72■□□□□ 0.59
PMS1P54277 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PMS1P54277 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.72■□□□□ 0.59
PMS1P54277 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.72■□□□□ 0.59
PMS1P54277 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PMS1P54277 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PMS1P54277 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 DOC2GP-204ENST00000639052 2548 ntBASIC18.71■□□□□ 0.59
PMS1P54277 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.71■□□□□ 0.59
PMS1P54277 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PMS1P54277 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.71■□□□□ 0.59
PMS1P54277 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.71■□□□□ 0.59
PMS1P54277 AF238378.1-201ENST00000526806 358 ntBASIC18.71■□□□□ 0.59
PMS1P54277 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.71■□□□□ 0.59
PMS1P54277 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.71■□□□□ 0.59
PMS1P54277 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.71■□□□□ 0.59
PMS1P54277 AC091304.2-201ENST00000564639 760 ntBASIC18.71■□□□□ 0.59
PMS1P54277 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.71■□□□□ 0.59
PMS1P54277 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.71■□□□□ 0.59
PMS1P54277 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.71■□□□□ 0.59
PMS1P54277 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PMS1P54277 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PMS1P54277 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PMS1P54277 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PMS1P54277 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.7■□□□□ 0.58
PMS1P54277 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.7■□□□□ 0.58
PMS1P54277 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PMS1P54277 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.7■□□□□ 0.58
PMS1P54277 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.7■□□□□ 0.58
PMS1P54277 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PMS1P54277 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PMS1P54277 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.7■□□□□ 0.58
PMS1P54277 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PMS1P54277 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.7■□□□□ 0.58
PMS1P54277 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.7■□□□□ 0.58
PMS1P54277 PRELID1P1-202ENST00000567272 903 ntBASIC18.7■□□□□ 0.58
PMS1P54277 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.7■□□□□ 0.58
PMS1P54277 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.7■□□□□ 0.58
PMS1P54277 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.7■□□□□ 0.58
PMS1P54277 MTDHP4-201ENST00000600287 670 ntBASIC18.7■□□□□ 0.58
PMS1P54277 AC025062.2-201ENST00000605477 670 ntBASIC18.7■□□□□ 0.58
PMS1P54277 AL589182.2-201ENST00000619332 1049 ntBASIC18.7■□□□□ 0.58
PMS1P54277 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PMS1P54277 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.7■□□□□ 0.58
PMS1P54277 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 LINC00895-201ENST00000629028 1637 ntBASIC18.7■□□□□ 0.58
PMS1P54277 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PMS1P54277 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms