Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAB28P51157 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB28P51157 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB28P51157 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAB28P51157 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB28P51157 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB28P51157 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB28P51157 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB28P51157 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB28P51157 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAB28P51157 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB28P51157 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB28P51157 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB28P51157 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB28P51157 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAB28P51157 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB28P51157 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAB28P51157 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB28P51157 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB28P51157 POLD2P1-201ENST00000511220 997 ntBASIC16.41■□□□□ 0.22
RAB28P51157 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.41■□□□□ 0.22
RAB28P51157 AC005412.3-201ENST00000580309 715 ntBASIC16.41■□□□□ 0.22
RAB28P51157 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB28P51157 ACTL9-202ENST00000612068 1252 ntBASIC16.41■□□□□ 0.22
RAB28P51157 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB28P51157 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB28P51157 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB28P51157 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB28P51157 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB28P51157 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB28P51157 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB28P51157 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RAB28P51157 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.4■□□□□ 0.22
RAB28P51157 RHOQP3-201ENST00000437982 621 ntBASIC16.4■□□□□ 0.22
RAB28P51157 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 KRT18P2-201ENST00000447938 1258 ntBASIC16.4■□□□□ 0.22
RAB28P51157 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.4■□□□□ 0.22
RAB28P51157 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB28P51157 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB28P51157 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAB28P51157 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 AC091167.2-201ENST00000579581 588 ntBASIC16.4■□□□□ 0.22
RAB28P51157 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB28P51157 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB28P51157 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB28P51157 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
RAB28P51157 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
RAB28P51157 AL353732.1-201ENST00000569618 1459 ntBASIC16.4■□□□□ 0.22
RAB28P51157 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB28P51157 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB28P51157 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB28P51157 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAB28P51157 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB28P51157 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RAB28P51157 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB28P51157 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB28P51157 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB28P51157 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB28P51157 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB28P51157 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB28P51157 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RAB28P51157 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB28P51157 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms