Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 AC092068.3-201ENST00000587894 2016 ntBASIC17.74■□□□□ 0.43
MMP13P45452 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
MMP13P45452 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MMP13P45452 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 AC079776.2-201ENST00000641154 1609 ntBASIC17.74■□□□□ 0.43
MMP13P45452 AKR1C7P-201ENST00000305623 895 ntBASIC17.74■□□□□ 0.43
MMP13P45452 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP13P45452 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.74■□□□□ 0.43
MMP13P45452 SAPCD2P3-201ENST00000455031 850 ntBASIC17.74■□□□□ 0.43
MMP13P45452 UNC93B7-201ENST00000509439 705 ntBASIC17.74■□□□□ 0.43
MMP13P45452 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
MMP13P45452 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.74■□□□□ 0.43
MMP13P45452 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.74■□□□□ 0.43
MMP13P45452 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
MMP13P45452 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MMP13P45452 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MMP13P45452 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
MMP13P45452 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MMP13P45452 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP13P45452 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP13P45452 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MMP13P45452 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP13P45452 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP13P45452 AC092171.3-201ENST00000610122 2651 ntBASIC17.73■□□□□ 0.43
MMP13P45452 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MMP13P45452 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
MMP13P45452 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.73■□□□□ 0.43
MMP13P45452 MTDHP3-201ENST00000594186 672 ntBASIC17.73■□□□□ 0.43
MMP13P45452 AC008608.2-201ENST00000606089 416 ntBASIC17.73■□□□□ 0.43
MMP13P45452 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP13P45452 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP13P45452 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP13P45452 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP13P45452 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
MMP13P45452 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 SIGLEC16-201ENST00000599858 1437 ntBASIC17.72■□□□□ 0.43
MMP13P45452 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 AC148477.5-201ENST00000625164 1645 ntBASIC17.72■□□□□ 0.43
MMP13P45452 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MMP13P45452 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
MMP13P45452 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MMP13P45452 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP13P45452 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 AL450487.1-201ENST00000426799 995 ntBASIC17.72■□□□□ 0.43
MMP13P45452 SIGLEC30P-201ENST00000455569 941 ntBASIC17.72■□□□□ 0.43
MMP13P45452 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP13P45452 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.72■□□□□ 0.43
MMP13P45452 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 AL355877.3-201ENST00000622820 899 ntBASIC17.72■□□□□ 0.43
MMP13P45452 AC073592.4-201ENST00000623827 446 ntBASIC17.72■□□□□ 0.43
MMP13P45452 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
MMP13P45452 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MMP13P45452 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP13P45452 AC007950.2-201ENST00000615045 2347 ntBASIC17.72■□□□□ 0.43
MMP13P45452 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP13P45452 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP13P45452 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP13P45452 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms