Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN1AP38936 ABALON-201ENST00000629058 1903 ntBASIC14.54□□□□□ -0.08
CDKN1AP38936 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN1AP38936 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKN1AP38936 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN1AP38936 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CDKN1AP38936 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN1AP38936 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKN1AP38936 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN1AP38936 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN1AP38936 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDKN1AP38936 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKN1AP38936 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN1AP38936 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN1AP38936 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKN1AP38936 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKN1AP38936 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKN1AP38936 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDKN1AP38936 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CDKN1AP38936 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CDKN1AP38936 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 MIR770-201ENST00000390219 98 ntBASIC14.53□□□□□ -0.08
CDKN1AP38936 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKN1AP38936 AC112191.1-201ENST00000523689 701 ntBASIC14.53□□□□□ -0.08
CDKN1AP38936 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKN1AP38936 REXO1L3P-201ENST00000622202 1288 ntBASIC14.53□□□□□ -0.08
CDKN1AP38936 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN1AP38936 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN1AP38936 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDKN1AP38936 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKN1AP38936 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDKN1AP38936 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN1AP38936 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDKN1AP38936 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN1AP38936 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
CDKN1AP38936 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKN1AP38936 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKN1AP38936 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN1AP38936 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKN1AP38936 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN1AP38936 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN1AP38936 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.52□□□□□ -0.08
CDKN1AP38936 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKN1AP38936 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.52□□□□□ -0.08
CDKN1AP38936 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN1AP38936 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN1AP38936 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN1AP38936 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDKN1AP38936 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.52□□□□□ -0.09
CDKN1AP38936 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 TIMM8BP1-201ENST00000452384 211 ntBASIC14.52□□□□□ -0.09
CDKN1AP38936 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.52□□□□□ -0.09
CDKN1AP38936 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.52□□□□□ -0.09
CDKN1AP38936 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKN1AP38936 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.52□□□□□ -0.09
CDKN1AP38936 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.52□□□□□ -0.09
CDKN1AP38936 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDKN1AP38936 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.52□□□□□ -0.09
CDKN1AP38936 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDKN1AP38936 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 AC022145.2-201ENST00000598203 171 ntBASIC14.52□□□□□ -0.09
CDKN1AP38936 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 AC141586.5-201ENST00000624546 2050 ntBASIC14.52□□□□□ -0.09
CDKN1AP38936 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.52□□□□□ -0.09
CDKN1AP38936 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.52□□□□□ -0.09
CDKN1AP38936 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.52□□□□□ -0.09
CDKN1AP38936 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKN1AP38936 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.52□□□□□ -0.09
CDKN1AP38936 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 AC012317.2-201ENST00000623305 2251 ntBASIC14.52□□□□□ -0.09
CDKN1AP38936 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CDKN1AP38936 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN1AP38936 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDKN1AP38936 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN1AP38936 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
CDKN1AP38936 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN1AP38936 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN1AP38936 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.51□□□□□ -0.09
CDKN1AP38936 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms