Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 LINC00896-202ENST00000609602 2128 ntBASIC21.5■■□□□ 1.03
ATP6V1AP38606 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 BICD1-207ENST00000551848 1962 ntBASIC21.5■■□□□ 1.03
ATP6V1AP38606 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.5■■□□□ 1.03
ATP6V1AP38606 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 AC073389.1-201ENST00000595595 795 ntBASIC21.5■■□□□ 1.03
ATP6V1AP38606 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V1AP38606 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.5■■□□□ 1.03
ATP6V1AP38606 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATP6V1AP38606 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 HLA-V-204ENST00000476601 1289 ntBASIC21.49■■□□□ 1.03
ATP6V1AP38606 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 CYP2A7P1-201ENST00000595391 815 ntBASIC21.49■■□□□ 1.03
ATP6V1AP38606 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 AC087289.5-201ENST00000586076 3175 ntBASIC21.49■■□□□ 1.03
ATP6V1AP38606 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 AC020763.4-201ENST00000623414 4170 ntBASIC21.49■■□□□ 1.03
ATP6V1AP38606 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP6V1AP38606 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V1AP38606 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V1AP38606 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V1AP38606 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V1AP38606 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V1AP38606 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V1AP38606 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
ATP6V1AP38606 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ATP6V1AP38606 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V1AP38606 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V1AP38606 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V1AP38606 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
ATP6V1AP38606 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP6V1AP38606 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP6V1AP38606 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP6V1AP38606 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.48■■□□□ 1.03
ATP6V1AP38606 AC021097.1-201ENST00000607902 574 ntBASIC21.48■■□□□ 1.03
ATP6V1AP38606 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V1AP38606 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ATP6V1AP38606 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.48■■□□□ 1.03
ATP6V1AP38606 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ATP6V1AP38606 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V1AP38606 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP6V1AP38606 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6V1AP38606 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.47■■□□□ 1.03
ATP6V1AP38606 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6V1AP38606 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6V1AP38606 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ATP6V1AP38606 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6V1AP38606 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6V1AP38606 AC009477.1-201ENST00000452936 217 ntBASIC21.47■■□□□ 1.03
ATP6V1AP38606 KRT18P34-201ENST00000488218 1270 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms