Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT20P35900 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
KRT20P35900 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
KRT20P35900 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
KRT20P35900 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT20P35900 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT20P35900 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT20P35900 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
KRT20P35900 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.25■□□□□ 0.19
KRT20P35900 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
KRT20P35900 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT20P35900 AC091304.2-201ENST00000564639 760 ntBASIC16.25■□□□□ 0.19
KRT20P35900 AC109462.3-201ENST00000573934 613 ntBASIC16.25■□□□□ 0.19
KRT20P35900 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.25■□□□□ 0.19
KRT20P35900 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.25■□□□□ 0.19
KRT20P35900 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KRT20P35900 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
KRT20P35900 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 INTS4P1-201ENST00000438455 1935 ntBASIC16.25■□□□□ 0.19
KRT20P35900 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT20P35900 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
KRT20P35900 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.25■□□□□ 0.19
KRT20P35900 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
KRT20P35900 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT20P35900 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
KRT20P35900 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
KRT20P35900 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
KRT20P35900 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KRT20P35900 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
KRT20P35900 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
KRT20P35900 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
KRT20P35900 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.24■□□□□ 0.19
KRT20P35900 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT20P35900 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT20P35900 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT20P35900 MIR5100-201ENST00000579544 119 ntBASIC16.24■□□□□ 0.19
KRT20P35900 CLEC4GP1-201ENST00000596555 870 ntBASIC16.24■□□□□ 0.19
KRT20P35900 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT20P35900 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT20P35900 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
KRT20P35900 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
KRT20P35900 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT20P35900 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT20P35900 REXO1L11P-201ENST00000620964 1927 ntBASIC16.23■□□□□ 0.19
KRT20P35900 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
KRT20P35900 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT20P35900 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT20P35900 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.23■□□□□ 0.19
KRT20P35900 AC005104.2-201ENST00000427818 678 ntBASIC16.23■□□□□ 0.19
KRT20P35900 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT20P35900 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms