Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RPA3P35244 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.25■□□□□ 0.35
RPA3P35244 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RPA3P35244 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RPA3P35244 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RPA3P35244 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RPA3P35244 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.25■□□□□ 0.35
RPA3P35244 AP000867.3-201ENST00000524675 377 ntBASIC17.25■□□□□ 0.35
RPA3P35244 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.25■□□□□ 0.35
RPA3P35244 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.25■□□□□ 0.35
RPA3P35244 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.25■□□□□ 0.35
RPA3P35244 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RPA3P35244 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RPA3P35244 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RPA3P35244 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RPA3P35244 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.25■□□□□ 0.35
RPA3P35244 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.25■□□□□ 0.35
RPA3P35244 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RPA3P35244 AC233702.3-201ENST00000578656 1387 ntBASIC17.25■□□□□ 0.35
RPA3P35244 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RPA3P35244 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.25■□□□□ 0.35
RPA3P35244 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.25■□□□□ 0.35
RPA3P35244 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPA3P35244 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.24■□□□□ 0.35
RPA3P35244 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.24■□□□□ 0.35
RPA3P35244 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPA3P35244 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RPA3P35244 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPA3P35244 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 MYCLP1-201ENST00000372451 1075 ntBASIC17.24■□□□□ 0.35
RPA3P35244 AL845331.1-201ENST00000424978 1190 ntBASIC17.24■□□□□ 0.35
RPA3P35244 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPA3P35244 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.24■□□□□ 0.35
RPA3P35244 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.24■□□□□ 0.35
RPA3P35244 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.24■□□□□ 0.35
RPA3P35244 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.24■□□□□ 0.35
RPA3P35244 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.24■□□□□ 0.35
RPA3P35244 MIR3180-1-201ENST00000580374 94 ntBASIC17.24■□□□□ 0.35
RPA3P35244 MIR3180-3-201ENST00000584616 94 ntBASIC17.24■□□□□ 0.35
RPA3P35244 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 AC019129.2-201ENST00000609837 1235 ntBASIC17.24■□□□□ 0.35
RPA3P35244 AL353801.3-201ENST00000609898 542 ntBASIC17.24■□□□□ 0.35
RPA3P35244 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.24■□□□□ 0.35
RPA3P35244 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.24■□□□□ 0.35
RPA3P35244 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RPA3P35244 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RPA3P35244 PAUPAR-201ENST00000630360 2965 ntBASIC17.24■□□□□ 0.35
RPA3P35244 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPA3P35244 EGFEM1P-202ENST00000431685 1563 ntBASIC17.23■□□□□ 0.35
RPA3P35244 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RPA3P35244 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.23■□□□□ 0.35
RPA3P35244 AC097374.2-201ENST00000618617 1306 ntBASIC17.23■□□□□ 0.35
RPA3P35244 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.23■□□□□ 0.35
RPA3P35244 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 AC022188.1-201ENST00000620960 1664 ntBASIC17.23■□□□□ 0.35
RPA3P35244 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RPA3P35244 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.23■□□□□ 0.35
RPA3P35244 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.23■□□□□ 0.35
RPA3P35244 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.23■□□□□ 0.35
RPA3P35244 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
RPA3P35244 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RPA3P35244 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RPA3P35244 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.23■□□□□ 0.35
RPA3P35244 HCG4P8-203ENST00000443049 980 ntBASIC17.23■□□□□ 0.35
RPA3P35244 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.23■□□□□ 0.35
RPA3P35244 MINOS1P3-201ENST00000457048 203 ntBASIC17.23■□□□□ 0.35
RPA3P35244 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RPA3P35244 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.23■□□□□ 0.35
RPA3P35244 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPA3P35244 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms