Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.13■□□□□ 0.33
LSP1P33241 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.13■□□□□ 0.33
LSP1P33241 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.13■□□□□ 0.33
LSP1P33241 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.13■□□□□ 0.33
LSP1P33241 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.13■□□□□ 0.33
LSP1P33241 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LSP1P33241 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
LSP1P33241 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LSP1P33241 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LSP1P33241 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LSP1P33241 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.12■□□□□ 0.33
LSP1P33241 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.12■□□□□ 0.33
LSP1P33241 AP005117.1-202ENST00000581724 1908 ntBASIC17.12■□□□□ 0.33
LSP1P33241 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LSP1P33241 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.12■□□□□ 0.33
LSP1P33241 C1QBPP2-201ENST00000528754 825 ntBASIC17.12■□□□□ 0.33
LSP1P33241 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.12■□□□□ 0.33
LSP1P33241 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.12■□□□□ 0.33
LSP1P33241 AL023803.3-201ENST00000615559 522 ntBASIC17.12■□□□□ 0.33
LSP1P33241 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LSP1P33241 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.12■□□□□ 0.33
LSP1P33241 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.12■□□□□ 0.33
LSP1P33241 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.12■□□□□ 0.33
LSP1P33241 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSP1P33241 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.12■□□□□ 0.33
LSP1P33241 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.11■□□□□ 0.33
LSP1P33241 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LSP1P33241 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.11■□□□□ 0.33
LSP1P33241 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LSP1P33241 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.11■□□□□ 0.33
LSP1P33241 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.11■□□□□ 0.33
LSP1P33241 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.11■□□□□ 0.33
LSP1P33241 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.11■□□□□ 0.33
LSP1P33241 RN7SL471P-201ENST00000580476 299 ntBASIC17.11■□□□□ 0.33
LSP1P33241 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LSP1P33241 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LSP1P33241 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LSP1P33241 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LSP1P33241 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.11■□□□□ 0.33
LSP1P33241 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.11■□□□□ 0.33
LSP1P33241 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSP1P33241 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.11■□□□□ 0.33
LSP1P33241 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LSP1P33241 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.1■□□□□ 0.33
LSP1P33241 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
LSP1P33241 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
LSP1P33241 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSP1P33241 PVRIG2P-201ENST00000435460 978 ntBASIC17.1■□□□□ 0.33
LSP1P33241 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.1■□□□□ 0.33
LSP1P33241 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms