Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 FAM220CP-201ENST00000395253 831 ntBASIC17.98■□□□□ 0.47
CHRNA3P32297 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.98■□□□□ 0.47
CHRNA3P32297 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.98■□□□□ 0.47
CHRNA3P32297 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.98■□□□□ 0.47
CHRNA3P32297 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.98■□□□□ 0.47
CHRNA3P32297 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.98■□□□□ 0.47
CHRNA3P32297 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.98■□□□□ 0.47
CHRNA3P32297 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.98■□□□□ 0.47
CHRNA3P32297 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA3P32297 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA3P32297 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA3P32297 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA3P32297 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA3P32297 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CHRNA3P32297 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CHRNA3P32297 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHRNA3P32297 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CHRNA3P32297 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CHRNA3P32297 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CHRNA3P32297 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHRNA3P32297 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.97■□□□□ 0.47
CHRNA3P32297 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRNA3P32297 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.97■□□□□ 0.47
CHRNA3P32297 AC008608.2-201ENST00000606089 416 ntBASIC17.97■□□□□ 0.47
CHRNA3P32297 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRNA3P32297 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRNA3P32297 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CHRNA3P32297 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNA3P32297 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.96■□□□□ 0.47
CHRNA3P32297 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHRNA3P32297 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.96■□□□□ 0.47
CHRNA3P32297 RBM17P3-201ENST00000417687 1192 ntBASIC17.96■□□□□ 0.47
CHRNA3P32297 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNA3P32297 AC106795.1-205ENST00000512851 1056 ntBASIC17.96■□□□□ 0.47
CHRNA3P32297 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.96■□□□□ 0.47
CHRNA3P32297 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.96■□□□□ 0.47
CHRNA3P32297 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNA3P32297 AP001269.4-201ENST00000609611 512 ntBASIC17.96■□□□□ 0.47
CHRNA3P32297 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNA3P32297 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.96■□□□□ 0.47
CHRNA3P32297 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CHRNA3P32297 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRNA3P32297 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRNA3P32297 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.96■□□□□ 0.46
CHRNA3P32297 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.96■□□□□ 0.46
CHRNA3P32297 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.96■□□□□ 0.46
CHRNA3P32297 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.96■□□□□ 0.46
CHRNA3P32297 AC092171.3-201ENST00000610122 2651 ntBASIC17.95■□□□□ 0.46
CHRNA3P32297 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CHRNA3P32297 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CHRNA3P32297 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.95■□□□□ 0.46
CHRNA3P32297 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms