Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC091812.2-201ENST00000619081 385 ntBASIC17.42■□□□□ 0.38
SLC6A4P31645 AL645728.2-201ENST00000641974 660 ntBASIC17.42■□□□□ 0.38
SLC6A4P31645 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A4P31645 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC6A4P31645 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A4P31645 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLC6A4P31645 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A4P31645 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLC6A4P31645 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC6A4P31645 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 AL021920.2-201ENST00000624828 1351 ntBASIC17.41■□□□□ 0.38
SLC6A4P31645 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A4P31645 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A4P31645 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 AP001094.4-201ENST00000579008 2176 ntBASIC17.41■□□□□ 0.38
SLC6A4P31645 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC6A4P31645 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A4P31645 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A4P31645 YBX1P5-201ENST00000509441 847 ntBASIC17.41■□□□□ 0.38
SLC6A4P31645 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A4P31645 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
SLC6A4P31645 AL031432.2-201ENST00000566714 459 ntBASIC17.41■□□□□ 0.38
SLC6A4P31645 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A4P31645 AL928711.1-201ENST00000570165 459 ntBASIC17.41■□□□□ 0.38
SLC6A4P31645 MIR4469-201ENST00000583919 79 ntBASIC17.41■□□□□ 0.38
SLC6A4P31645 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC6A4P31645 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
SLC6A4P31645 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A4P31645 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 AL691403.2-201ENST00000618460 490 ntBASIC17.41■□□□□ 0.38
SLC6A4P31645 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A4P31645 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A4P31645 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC6A4P31645 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A4P31645 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A4P31645 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SLC6A4P31645 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 MPDU1-223ENST00000582151 728 ntBASIC17.4■□□□□ 0.38
SLC6A4P31645 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 AC134684.3-201ENST00000641758 218 ntBASIC17.4■□□□□ 0.38
SLC6A4P31645 AC092902.6-201ENST00000641783 218 ntBASIC17.4■□□□□ 0.38
SLC6A4P31645 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A4P31645 AC012569.1-201ENST00000591191 1524 ntBASIC17.4■□□□□ 0.38
SLC6A4P31645 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A4P31645 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A4P31645 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC6A4P31645 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC6A4P31645 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.39■□□□□ 0.38
SLC6A4P31645 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SLC6A4P31645 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC6A4P31645 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC6A4P31645 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC6A4P31645 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 MKNK2P1-201ENST00000437526 628 ntBASIC17.39■□□□□ 0.37
SLC6A4P31645 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC6A4P31645 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC6A4P31645 AC091167.2-201ENST00000579581 588 ntBASIC17.39■□□□□ 0.37
SLC6A4P31645 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC6A4P31645 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SLC6A4P31645 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A4P31645 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A4P31645 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SLC6A4P31645 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SLC6A4P31645 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A4P31645 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A4P31645 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms