Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 RN7SL828P-201ENST00000607615 303 ntBASIC20.56■□□□□ 0.88
HOXA10P31260 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA10P31260 AC073439.1-201ENST00000624121 1774 ntBASIC20.56■□□□□ 0.88
HOXA10P31260 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HOXA10P31260 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA10P31260 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXA10P31260 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXA10P31260 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXA10P31260 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA10P31260 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HOXA10P31260 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXA10P31260 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA10P31260 AC098859.1-201ENST00000502915 1238 ntBASIC20.55■□□□□ 0.88
HOXA10P31260 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA10P31260 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA10P31260 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA10P31260 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA10P31260 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.55■□□□□ 0.88
HOXA10P31260 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXA10P31260 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA10P31260 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.55■□□□□ 0.88
HOXA10P31260 AL133215.2-201ENST00000609242 977 ntBASIC20.55■□□□□ 0.88
HOXA10P31260 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA10P31260 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA10P31260 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA10P31260 CETN4P-206ENST00000642099 2168 ntBASIC20.55■□□□□ 0.88
HOXA10P31260 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA10P31260 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA10P31260 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXA10P31260 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HOXA10P31260 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA10P31260 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.54■□□□□ 0.88
HOXA10P31260 ZNF890P-202ENST00000530367 1156 ntBASIC20.54■□□□□ 0.88
HOXA10P31260 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXA10P31260 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA10P31260 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA10P31260 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.54■□□□□ 0.88
HOXA10P31260 AC004840.1-201ENST00000636359 365 ntBASIC20.54■□□□□ 0.88
HOXA10P31260 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA10P31260 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HOXA10P31260 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA10P31260 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA10P31260 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HOXA10P31260 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA10P31260 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA10P31260 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA10P31260 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXA10P31260 AL353779.1-201ENST00000434793 351 ntBASIC20.53■□□□□ 0.88
HOXA10P31260 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA10P31260 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA10P31260 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
HOXA10P31260 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXA10P31260 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA10P31260 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA10P31260 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA10P31260 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA10P31260 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA10P31260 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA10P31260 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA10P31260 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HOXA10P31260 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA10P31260 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA10P31260 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.52■□□□□ 0.88
HOXA10P31260 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA10P31260 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
HOXA10P31260 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA10P31260 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA10P31260 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXA10P31260 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA10P31260 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA10P31260 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms