Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SHC1P29353 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SHC1P29353 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 SCARNA2-201ENST00000458748 420 ntBASIC15.65■□□□□ 0.1
SHC1P29353 RNPS1P1-201ENST00000507437 918 ntBASIC15.65■□□□□ 0.1
SHC1P29353 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SHC1P29353 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.65■□□□□ 0.1
SHC1P29353 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.65■□□□□ 0.1
SHC1P29353 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.65■□□□□ 0.1
SHC1P29353 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 AL022326.1-202ENST00000641533 845 ntBASIC15.65■□□□□ 0.1
SHC1P29353 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SHC1P29353 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SHC1P29353 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SHC1P29353 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 RPS2P1-201ENST00000434010 821 ntBASIC15.64■□□□□ 0.09
SHC1P29353 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 AC018712.1-201ENST00000455767 687 ntBASIC15.64■□□□□ 0.09
SHC1P29353 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.64■□□□□ 0.09
SHC1P29353 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.64■□□□□ 0.09
SHC1P29353 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.64■□□□□ 0.09
SHC1P29353 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.64■□□□□ 0.09
SHC1P29353 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.64■□□□□ 0.09
SHC1P29353 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.64■□□□□ 0.09
SHC1P29353 AC064862.7-201ENST00000604520 867 ntBASIC15.64■□□□□ 0.09
SHC1P29353 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.64■□□□□ 0.09
SHC1P29353 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SHC1P29353 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SHC1P29353 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SHC1P29353 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHC1P29353 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SHC1P29353 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SHC1P29353 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.63■□□□□ 0.09
SHC1P29353 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SHC1P29353 AC060834.1-201ENST00000443027 2032 ntBASIC15.63■□□□□ 0.09
SHC1P29353 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.63■□□□□ 0.09
SHC1P29353 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SHC1P29353 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
SHC1P29353 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SHC1P29353 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.63■□□□□ 0.09
SHC1P29353 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 AC011270.2-201ENST00000624293 2550 ntBASIC15.63■□□□□ 0.09
SHC1P29353 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms