Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PTPN6P29350 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PTPN6P29350 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 AC148477.5-201ENST00000625164 1645 ntBASIC16.17■□□□□ 0.18
PTPN6P29350 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN6P29350 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PTPN6P29350 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.17■□□□□ 0.18
PTPN6P29350 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN6P29350 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 EMBP1-201ENST00000458200 901 ntBASIC16.17■□□□□ 0.18
PTPN6P29350 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.17■□□□□ 0.18
PTPN6P29350 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.17■□□□□ 0.18
PTPN6P29350 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.17■□□□□ 0.18
PTPN6P29350 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.17■□□□□ 0.18
PTPN6P29350 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN6P29350 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PTPN6P29350 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN6P29350 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN6P29350 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN6P29350 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN6P29350 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PTPN6P29350 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN6P29350 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN6P29350 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTPN6P29350 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
PTPN6P29350 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN6P29350 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 AKR1C7P-201ENST00000305623 895 ntBASIC16.16■□□□□ 0.18
PTPN6P29350 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN6P29350 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PTPN6P29350 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN6P29350 FAAHP1-202ENST00000446499 1238 ntBASIC16.16■□□□□ 0.18
PTPN6P29350 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN6P29350 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN6P29350 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN6P29350 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN6P29350 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 REXO1L6P-202ENST00000619970 1078 ntBASIC16.16■□□□□ 0.18
PTPN6P29350 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PTPN6P29350 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 AL391005.1-201ENST00000623953 2435 ntBASIC16.16■□□□□ 0.18
PTPN6P29350 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTPN6P29350 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN6P29350 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PTPN6P29350 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN6P29350 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN6P29350 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PTPN6P29350 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PTPN6P29350 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
PTPN6P29350 CYP2T1P-202ENST00000641596 2535 ntBASIC16.15■□□□□ 0.18
PTPN6P29350 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN6P29350 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN6P29350 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PTPN6P29350 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms