Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DMAP28067 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DMAP28067 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DMAP28067 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DMAP28067 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 AC005104.2-201ENST00000427818 678 ntBASIC14.79□□□□□ -0.04
HLA-DMAP28067 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DMAP28067 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 AC093525.9-201ENST00000624961 1746 ntBASIC14.79□□□□□ -0.04
HLA-DMAP28067 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DMAP28067 FLJ16779-201ENST00000612722 7638 ntBASIC14.79□□□□□ -0.04
HLA-DMAP28067 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DMAP28067 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DMAP28067 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 SLC25A1P3-201ENST00000395415 828 ntBASIC14.78□□□□□ -0.04
HLA-DMAP28067 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 AC007663.1-201ENST00000438948 1240 ntBASIC14.78□□□□□ -0.04
HLA-DMAP28067 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 AC113404.2-201ENST00000507884 177 ntBASIC14.78□□□□□ -0.04
HLA-DMAP28067 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 AC124947.2-201ENST00000547118 1133 ntBASIC14.78□□□□□ -0.04
HLA-DMAP28067 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 MIR3917-201ENST00000580971 93 ntBASIC14.78□□□□□ -0.04
HLA-DMAP28067 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 AL139327.4-201ENST00000612362 153 ntBASIC14.78□□□□□ -0.04
HLA-DMAP28067 AC116562.4-202ENST00000641738 218 ntBASIC14.78□□□□□ -0.04
HLA-DMAP28067 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 AC013268.4-201ENST00000637413 2228 ntBASIC14.78□□□□□ -0.04
HLA-DMAP28067 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 CICP13-201ENST00000422015 2789 ntBASIC14.78□□□□□ -0.04
HLA-DMAP28067 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMAP28067 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DMAP28067 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.77□□□□□ -0.04
HLA-DMAP28067 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DMAP28067 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.77□□□□□ -0.04
HLA-DMAP28067 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DMAP28067 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.77□□□□□ -0.04
HLA-DMAP28067 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.04
HLA-DMAP28067 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DMAP28067 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DMAP28067 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMAP28067 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.77□□□□□ -0.04
HLA-DMAP28067 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DMAP28067 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMAP28067 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms