Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VARSP26640 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.8■□□□□ 0.28
VARSP26640 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VARSP26640 HLA-A-201ENST00000376802 1334 ntBASIC16.8■□□□□ 0.28
VARSP26640 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.8■□□□□ 0.28
VARSP26640 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.8■□□□□ 0.28
VARSP26640 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.8■□□□□ 0.28
VARSP26640 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.8■□□□□ 0.28
VARSP26640 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.8■□□□□ 0.28
VARSP26640 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.8■□□□□ 0.28
VARSP26640 STK19B-204ENST00000512515 211 ntBASIC16.8■□□□□ 0.28
VARSP26640 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
VARSP26640 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.8■□□□□ 0.28
VARSP26640 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.8■□□□□ 0.28
VARSP26640 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.8■□□□□ 0.28
VARSP26640 AP001005.1-201ENST00000571755 1248 ntBASIC16.8■□□□□ 0.28
VARSP26640 AL591684.3-201ENST00000605187 298 ntBASIC16.8■□□□□ 0.28
VARSP26640 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.8■□□□□ 0.28
VARSP26640 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.8■□□□□ 0.28
VARSP26640 AC106886.4-201ENST00000623557 2502 ntBASIC16.8■□□□□ 0.28
VARSP26640 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.8■□□□□ 0.28
VARSP26640 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
VARSP26640 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
VARSP26640 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VARSP26640 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.8■□□□□ 0.28
VARSP26640 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VARSP26640 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.79■□□□□ 0.28
VARSP26640 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.79■□□□□ 0.28
VARSP26640 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
VARSP26640 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
VARSP26640 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VARSP26640 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VARSP26640 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.79■□□□□ 0.28
VARSP26640 KRT18P13-201ENST00000400056 1290 ntBASIC16.79■□□□□ 0.28
VARSP26640 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.79■□□□□ 0.28
VARSP26640 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VARSP26640 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.79■□□□□ 0.28
VARSP26640 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.79■□□□□ 0.28
VARSP26640 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.79■□□□□ 0.28
VARSP26640 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VARSP26640 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VARSP26640 REXO1L6P-202ENST00000619970 1078 ntBASIC16.79■□□□□ 0.28
VARSP26640 PMPCAP1-201ENST00000508114 1576 ntBASIC16.79■□□□□ 0.28
VARSP26640 AC009336.1-201ENST00000608941 1553 ntBASIC16.79■□□□□ 0.28
VARSP26640 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VARSP26640 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.79■□□□□ 0.28
VARSP26640 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VARSP26640 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.79■□□□□ 0.28
VARSP26640 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VARSP26640 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.78■□□□□ 0.28
VARSP26640 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.78■□□□□ 0.28
VARSP26640 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.78■□□□□ 0.28
VARSP26640 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VARSP26640 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
VARSP26640 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.78■□□□□ 0.28
VARSP26640 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.78■□□□□ 0.28
VARSP26640 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VARSP26640 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
VARSP26640 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VARSP26640 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms