Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
BRD2P25440 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BRD2P25440 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.34■□□□□ 0.53
BRD2P25440 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.34■□□□□ 0.53
BRD2P25440 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
BRD2P25440 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.34■□□□□ 0.53
BRD2P25440 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.34■□□□□ 0.53
BRD2P25440 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BRD2P25440 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.34■□□□□ 0.53
BRD2P25440 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BRD2P25440 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD2P25440 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.34■□□□□ 0.53
BRD2P25440 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
BRD2P25440 AC022211.2-201ENST00000585075 2527 ntBASIC18.33■□□□□ 0.53
BRD2P25440 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRD2P25440 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD2P25440 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.33■□□□□ 0.53
BRD2P25440 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
BRD2P25440 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.33■□□□□ 0.53
BRD2P25440 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD2P25440 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD2P25440 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.33■□□□□ 0.53
BRD2P25440 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.33■□□□□ 0.53
BRD2P25440 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
BRD2P25440 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD2P25440 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD2P25440 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD2P25440 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BRD2P25440 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRD2P25440 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
BRD2P25440 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.33■□□□□ 0.52
BRD2P25440 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.33■□□□□ 0.52
BRD2P25440 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.33■□□□□ 0.52
BRD2P25440 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.33■□□□□ 0.52
BRD2P25440 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
BRD2P25440 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD2P25440 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.33■□□□□ 0.52
BRD2P25440 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD2P25440 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
BRD2P25440 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC18.33■□□□□ 0.52
BRD2P25440 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD2P25440 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD2P25440 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD2P25440 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD2P25440 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
BRD2P25440 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD2P25440 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD2P25440 AC104581.4-201ENST00000623126 3052 ntBASIC18.33■□□□□ 0.52
BRD2P25440 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD2P25440 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
BRD2P25440 NCF1C-201ENST00000438382 1427 ntBASIC18.32■□□□□ 0.52
BRD2P25440 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.32■□□□□ 0.52
BRD2P25440 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD2P25440 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRD2P25440 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BRD2P25440 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD2P25440 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.32■□□□□ 0.52
BRD2P25440 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD2P25440 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.32■□□□□ 0.52
BRD2P25440 RPS2P1-201ENST00000434010 821 ntBASIC18.32■□□□□ 0.52
BRD2P25440 FAM197Y8-203ENST00000450145 560 ntBASIC18.32■□□□□ 0.52
BRD2P25440 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.32■□□□□ 0.52
BRD2P25440 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.32■□□□□ 0.52
BRD2P25440 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRD2P25440 AL353135.1-201ENST00000606729 504 ntBASIC18.32■□□□□ 0.52
BRD2P25440 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.32■□□□□ 0.52
BRD2P25440 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
BRD2P25440 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.32■□□□□ 0.52
BRD2P25440 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRD2P25440 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD2P25440 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD2P25440 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms