Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 PRORSD1P-202ENST00000563365 2154 ntBASIC14.59□□□□□ -0.07
TNFSF4P23510 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 PI4KAP1-204ENST00000612579 1703 ntBASIC14.59□□□□□ -0.07
TNFSF4P23510 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TNFSF4P23510 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.59□□□□□ -0.07
TNFSF4P23510 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TNFSF4P23510 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TNFSF4P23510 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.59□□□□□ -0.07
TNFSF4P23510 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 RNA5SP419-201ENST00000515908 135 ntBASIC14.59□□□□□ -0.07
TNFSF4P23510 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 AC012640.2-201ENST00000561606 901 ntBASIC14.59□□□□□ -0.07
TNFSF4P23510 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.59□□□□□ -0.07
TNFSF4P23510 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 AL049840.3-201ENST00000602669 611 ntBASIC14.59□□□□□ -0.07
TNFSF4P23510 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TNFSF4P23510 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.59□□□□□ -0.07
TNFSF4P23510 ZNF259P1-201ENST00000407656 1365 ntBASIC14.59□□□□□ -0.07
TNFSF4P23510 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.59□□□□□ -0.07
TNFSF4P23510 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TNFSF4P23510 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TNFSF4P23510 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TNFSF4P23510 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
TNFSF4P23510 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.58□□□□□ -0.07
TNFSF4P23510 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TNFSF4P23510 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
TNFSF4P23510 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
TNFSF4P23510 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TNFSF4P23510 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TNFSF4P23510 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TNFSF4P23510 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TNFSF4P23510 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.58□□□□□ -0.07
TNFSF4P23510 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.58□□□□□ -0.07
TNFSF4P23510 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
TNFSF4P23510 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TNFSF4P23510 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFSF4P23510 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
TNFSF4P23510 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 TNRC18P3-201ENST00000441896 2691 ntBASIC14.58□□□□□ -0.08
TNFSF4P23510 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 AC073621.1-201ENST00000392730 636 ntBASIC14.58□□□□□ -0.08
TNFSF4P23510 PTCHD3P3-201ENST00000403073 906 ntBASIC14.58□□□□□ -0.08
TNFSF4P23510 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.58□□□□□ -0.08
TNFSF4P23510 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.58□□□□□ -0.08
TNFSF4P23510 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFSF4P23510 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.58□□□□□ -0.08
TNFSF4P23510 AC117500.6-201ENST00000624871 588 ntBASIC14.58□□□□□ -0.08
TNFSF4P23510 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TNFSF4P23510 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TNFSF4P23510 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TNFSF4P23510 IL9RP2-201ENST00000423948 1312 ntBASIC14.58□□□□□ -0.08
TNFSF4P23510 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFSF4P23510 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFSF4P23510 AC116353.5-201ENST00000638148 1699 ntBASIC14.58□□□□□ -0.08
TNFSF4P23510 AC243591.1-201ENST00000452967 1364 ntBASIC14.58□□□□□ -0.08
TNFSF4P23510 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TNFSF4P23510 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFSF4P23510 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 AC099398.1-201ENST00000567919 2776 ntBASIC14.57□□□□□ -0.08
TNFSF4P23510 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFSF4P23510 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
TNFSF4P23510 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFSF4P23510 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFSF4P23510 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFSF4P23510 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms