Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 EML2-219ENST00000588889 967 ntTSL 517.23■□□□□ 0.352e-7■■■□□ 14.7
RPS3P23396 HUWE1-201ENST00000218328 5488 ntTSL 517.19■□□□□ 0.345e-7■■■□□ 14.7
RPS3P23396 EML2-211ENST00000587804 537 ntTSL 411.34□□□□□ -0.592e-7■■■□□ 14.7
RPS3P23396 EML2-231ENST00000593255 553 ntTSL 410.63□□□□□ -0.712e-7■■■□□ 14.7
RPS3P23396 EML2-226ENST00000591721 526 ntTSL 310.54□□□□□ -0.722e-7■■■□□ 14.7
RPS3P23396 CALR-207ENST00000590325 781 ntTSL 214.04□□□□□ -0.162e-22■■■□□ 14.7
RPS3P23396 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.083e-7■■■□□ 14.7
RPS3P23396 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.7□□□□□ -0.063e-7■■■□□ 14.7
RPS3P23396 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.11□□□□□ -0.153e-7■■■□□ 14.7
RPS3P23396 STIP1-204ENST00000536973 738 ntTSL 512.92□□□□□ -0.343e-7■■■□□ 14.7
RPS3P23396 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.017e-7■■■□□ 14.7
RPS3P23396 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.53□□□□□ -1.527e-7■■■□□ 14.7
RPS3P23396 DDX39B-206ENST00000419338 928 ntTSL 513.23□□□□□ -0.291e-12■■■□□ 14.7
RPS3P23396 DDX39B-210ENST00000431908 914 ntTSL 511.33□□□□□ -0.61e-12■■■□□ 14.7
RPS3P23396 DDX39B-219ENST00000481456 5158 ntTSL 211.15□□□□□ -0.621e-12■■■□□ 14.7
RPS3P23396 DDX39B-213ENST00000456976 720 ntTSL 511.01□□□□□ -0.651e-12■■■□□ 14.7
RPS3P23396 DDX39B-204ENST00000418897 583 ntTSL 310.89□□□□□ -0.671e-12■■■□□ 14.7
RPS3P23396 DDX39B-208ENST00000428098 817 ntTSL 310.89□□□□□ -0.671e-12■■■□□ 14.7
RPS3P23396 DDX39B-212ENST00000456662 932 ntTSL 510.89□□□□□ -0.671e-12■■■□□ 14.7
RPS3P23396 DDX39B-209ENST00000428450 633 ntTSL 410.62□□□□□ -0.711e-12■■■□□ 14.7
RPS3P23396 DDX39B-211ENST00000449757 591 ntTSL 39.75□□□□□ -0.851e-12■■■□□ 14.7
RPS3P23396 DDX39B-220ENST00000482195 1232 ntTSL 29.75□□□□□ -0.851e-12■■■□□ 14.7
RPS3P23396 DDX39B-207ENST00000427214 1005 ntTSL 56.43□□□□□ -1.381e-12■■■□□ 14.7
RPS3P23396 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.17■□□□□ 0.51e-8■■■□□ 14.7
RPS3P23396 CANT1-203ENST00000586916 769 ntTSL 317.15■□□□□ 0.341e-8■■■□□ 14.7
RPS3P23396 CANT1-213ENST00000592033 502 ntTSL 217.15■□□□□ 0.341e-8■■■□□ 14.7
RPS3P23396 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.256e-9■■■□□ 14.7
RPS3P23396 CANT1-212ENST00000591811 466 ntTSL 216.2■□□□□ 0.181e-8■■■□□ 14.7
RPS3P23396 CANT1-205ENST00000588075 881 ntTSL 215.39■□□□□ 0.051e-8■■■□□ 14.7
RPS3P23396 CANT1-209ENST00000591625 599 ntTSL 414.97□□□□□ -0.011e-8■■■□□ 14.7
RPS3P23396 CANT1-208ENST00000590370 614 ntTSL 213.37□□□□□ -0.271e-8■■■□□ 14.7
RPS3P23396 MGST2-202ENST00000502587 663 ntTSL 213.15□□□□□ -0.36e-11■■■□□ 14.7
RPS3P23396 PSMD8-205ENST00000591250 578 ntTSL 311.69□□□□□ -0.541e-8■■■□□ 14.7
RPS3P23396 SRPRB-203ENST00000481356 1487 ntTSL 210.74□□□□□ -0.691e-8■■■□□ 14.7
RPS3P23396 RPL24-203ENST00000469605 799 ntTSL 2 BASIC10.43□□□□□ -0.744e-9■■■□□ 14.7
RPS3P23396 RPL24-205ENST00000488288 1857 ntTSL 210.32□□□□□ -0.761e-8■■■□□ 14.7
RPS3P23396 NSFL1C-210ENST00000553571 752 ntTSL 49.54□□□□□ -0.881e-8■■■□□ 14.7
RPS3P23396 SRPRB-202ENST00000466636 917 ntTSL 39.48□□□□□ -0.891e-8■■■□□ 14.7
RPS3P23396 RPL24-202ENST00000464595 668 ntTSL 1 (best)7.88□□□□□ -1.151e-8■■■□□ 14.7
RPS3P23396 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.231e-8■■■□□ 14.7
RPS3P23396 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.47□□□□□ -1.371e-8■■■□□ 14.7
RPS3P23396 HNRNPK-209ENST00000483135 900 ntTSL 26.33□□□□□ -1.41e-8■■■□□ 14.7
RPS3P23396 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC5.5□□□□□ -1.538e-7■■■□□ 14.7
RPS3P23396 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.588e-7■■■□□ 14.7
RPS3P23396 DPF2-203ENST00000444314 940 ntTSL 215.3■□□□□ 0.046e-7■■■□□ 14.7
RPS3P23396 IARS-211ENST00000490438 887 ntTSL 213.55□□□□□ -0.246e-7■■■□□ 14.7
RPS3P23396 IARS-204ENST00000430417 414 ntTSL 35.47□□□□□ -1.536e-7■■■□□ 14.7
RPS3P23396 MARS-219ENST00000549603 402 ntTSL 310.82□□□□□ -0.684e-21■■■□□ 14.7
RPS3P23396 RBMX-204ENST00000464781 1852 ntTSL 213.77□□□□□ -0.215e-7■■■□□ 14.7
RPS3P23396 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC12.72□□□□□ -0.375e-7■■■□□ 14.7
RPS3P23396 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.465e-7■■■□□ 14.7
RPS3P23396 RBMX-212ENST00000568578 4887 ntTSL 1 (best)9.44□□□□□ -0.95e-7■■■□□ 14.7
RPS3P23396 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC9.13□□□□□ -0.955e-7■■■□□ 14.7
RPS3P23396 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.26□□□□□ -1.575e-7■■■□□ 14.7
RPS3P23396 ICAM1-204ENST00000588645 581 ntTSL 215.34■□□□□ 0.051e-8■■■□□ 14.7
RPS3P23396 RBM22-201ENST00000199814 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.893e-6■■■□□ 14.7
RPS3P23396 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.97□□□□□ -1.453e-6■■■□□ 14.7
RPS3P23396 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.274e-7■■■□□ 14.7
RPS3P23396 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.814e-7■■■□□ 14.7
RPS3P23396 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.743e-7■■■□□ 14.7
RPS3P23396 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.543e-7■■■□□ 14.7
RPS3P23396 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.013e-7■■■□□ 14.7
RPS3P23396 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.263e-7■■■□□ 14.7
RPS3P23396 CPED1-209ENST00000520801 553 ntTSL 410.89□□□□□ -0.673e-10■■■□□ 14.7
RPS3P23396 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.14■□□□□ 0.654e-25■■■□□ 14.7
RPS3P23396 TRIR-204ENST00000591254 988 ntTSL 224.64■■□□□ 1.541e-14■■■□□ 14.7
RPS3P23396 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.29■■□□□ 1.161e-14■■■□□ 14.7
RPS3P23396 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.88■■□□□ 1.091e-14■■■□□ 14.7
RPS3P23396 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.021e-14■■■□□ 14.7
RPS3P23396 RPS15A-206ENST00000569083 1022 ntTSL 2 BASIC10.97□□□□□ -0.651e-12■■■□□ 14.7
RPS3P23396 AP2M1-208ENST00000442686 673 ntTSL 28.17□□□□□ -1.12e-21■■■□□ 14.7
RPS3P23396 DDX5-208ENST00000578491 463 ntTSL 25.38□□□□□ -1.552e-21■■■□□ 14.7
RPS3P23396 KIAA1161-202ENST00000379142 480 ntTSL 517.74■□□□□ 0.431e-7■■■□□ 14.7
RPS3P23396 FERMT3-204ENST00000540957 588 ntTSL 520.88■□□□□ 0.936e-8■■■□□ 14.7
RPS3P23396 FERMT3-206ENST00000541326 890 ntTSL 319.06■□□□□ 0.646e-8■■■□□ 14.7
RPS3P23396 ALB-217ENST00000514786 577 ntTSL 40.78□□□□□ -2.281e-323■■■□□ 14.7
RPS3P23396 TLN1-203ENST00000464379 814 ntTSL 313.13□□□□□ -0.312e-7■■■□□ 14.7
RPS3P23396 CLU-216ENST00000523589 878 ntTSL 315.61■□□□□ 0.095e-13■■■□□ 14.7
RPS3P23396 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.22e-8■■■□□ 14.6
RPS3P23396 GTSF1-208ENST00000552395 671 ntTSL 57.32□□□□□ -1.242e-8■■■□□ 14.6
RPS3P23396 GTSF1-204ENST00000546931 902 ntTSL 55.36□□□□□ -1.552e-8■■■□□ 14.6
RPS3P23396 COASY-203ENST00000585811 625 ntTSL 214.55□□□□□ -0.086e-7■■■□□ 14.6
RPS3P23396 COASY-207ENST00000587214 539 ntTSL 414.55□□□□□ -0.086e-7■■■□□ 14.6
RPS3P23396 COASY-204ENST00000585909 570 ntTSL 214.18□□□□□ -0.146e-7■■■□□ 14.6
RPS3P23396 COASY-208ENST00000587858 569 ntTSL 413.87□□□□□ -0.196e-7■■■□□ 14.6
RPS3P23396 COASY-206ENST00000587157 551 ntTSL 410.42□□□□□ -0.746e-7■■■□□ 14.6
RPS3P23396 SEC61A1-207ENST00000498837 555 ntTSL 213.85□□□□□ -0.196e-9■■■□□ 14.6
RPS3P23396 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.071e-9■■■□□ 14.6
RPS3P23396 GAK-207ENST00000505819 1326 ntTSL 520.64■□□□□ 0.892e-19■■■□□ 14.6
RPS3P23396 GAK-209ENST00000507580 468 ntTSL 420.33■□□□□ 0.852e-19■■■□□ 14.6
RPS3P23396 GAK-219ENST00000512325 577 ntTSL 320.33■□□□□ 0.852e-19■■■□□ 14.6
RPS3P23396 GAK-202ENST00000502656 554 ntTSL 418.96■□□□□ 0.632e-19■■■□□ 14.6
RPS3P23396 UNC13D-212ENST00000589670 668 ntTSL 317.02■□□□□ 0.321e-18■■■□□ 14.6
RPS3P23396 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.98■□□□□ 0.152e-19■■■□□ 14.6
RPS3P23396 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.152e-19■■■□□ 14.6
RPS3P23396 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.96□□□□□ -0.172e-19■■■□□ 14.6
RPS3P23396 GAK-212ENST00000510022 618 ntTSL 49.76□□□□□ -0.852e-19■■■□□ 14.6
RPS3P23396 GAK-215ENST00000511229 568 ntTSL 35.68□□□□□ -1.52e-19■■■□□ 14.6
RPS3P23396 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.72□□□□□ -1.811e-23■■■□□ 14.6
RPS3P23396 PKM-207ENST00000562997 582 ntTSL 49.91□□□□□ -0.822e-14■■■□□ 14.6
Retrieved 100 of 24,271 protein–RNA pairs in 203.3 ms