RNA–Protein interactions for RNA: ENST00000218328.12

HUWE1-201, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene HUWE1, Length 5,488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-201ENST00000218328 DCAF8L2P0C7V8 631 aa30.31■■■□□ 2.44
HUWE1-201ENST00000218328 SUPT5HO00267 1087 aaKnown RBP29.2■■■□□ 2.27
HUWE1-201ENST00000218328 NISCHQ9Y2I1 1504 aa28.77■■■□□ 2.2
HUWE1-201ENST00000218328 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
HUWE1-201ENST00000218328 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
HUWE1-201ENST00000218328 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
HUWE1-201ENST00000218328 APLP2Q06481 763 aa27.77■■■□□ 2.04
HUWE1-201ENST00000218328 PCGF6Q9BYE7 350 aa27.68■■■□□ 2.02
HUWE1-201ENST00000218328 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
HUWE1-201ENST00000218328 TTBK1Q5TCY1 1321 aaPredicted RBP27.4■■□□□ 1.98
HUWE1-201ENST00000218328 CENPBP07199 599 aaPredicted RBP27.33■■□□□ 1.96
HUWE1-201ENST00000218328 ZEB1P37275 1124 aaPredicted RBP27.29■■□□□ 1.96
HUWE1-201ENST00000218328 CCER1Q8TC90 406 aaPredicted RBP27.11■■□□□ 1.93
HUWE1-201ENST00000218328 ERICH6Q7L0X2 663 aa27.08■■□□□ 1.93
HUWE1-201ENST00000218328 TRIM41Q8WV44 630 aa27.01■■□□□ 1.91
HUWE1-201ENST00000218328 RANGAP1P46060 587 aaPredicted RBP26.93■■□□□ 1.9
HUWE1-201ENST00000218328 YTHDC1Q96MU7 727 aaKnown RBP26.68■■□□□ 1.86
HUWE1-201ENST00000218328 UBTFP17480 764 aaKnown RBP26.68■■□□□ 1.86
HUWE1-201ENST00000218328 MYT1Q01538 1121 aa26.66■■□□□ 1.86
HUWE1-201ENST00000218328 ATP1B4Q9UN42 357 aaPredicted RBP26.65■■□□□ 1.86
HUWE1-201ENST00000218328 NEFLP07196 543 aa26.63■■□□□ 1.85
HUWE1-201ENST00000218328 TRIM26Q12899 539 aaPredicted RBP26.45■■□□□ 1.83
HUWE1-201ENST00000218328 PPARGC1BQ86YN6 1023 aaKnown RBP26.42■■□□□ 1.82
HUWE1-201ENST00000218328 HRCP23327 699 aa26.38■■□□□ 1.81
HUWE1-201ENST00000218328 LOC105371045A0A1W2PR82 267 aa26.02■■□□□ 1.76
HUWE1-201ENST00000218328 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
HUWE1-201ENST00000218328 ITGAEP38570 1179 aa25.91■■□□□ 1.74
HUWE1-201ENST00000218328 HNRNPUL2Q1KMD3 747 aaKnown RBP25.84■■□□□ 1.73
HUWE1-201ENST00000218328 DAXXQ9UER7 740 aaPredicted RBP25.83■■□□□ 1.73
HUWE1-201ENST00000218328 POLR3GLQ9BT43 218 aa25.77■■□□□ 1.72
HUWE1-201ENST00000218328 DIEXFQ68CQ4 756 aaKnown RBP25.65■■□□□ 1.7
HUWE1-201ENST00000218328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.64■■□□□ 1.69
HUWE1-201ENST00000218328 CNGB1Q14028 1251 aaPredicted RBP25.54■■□□□ 1.68
HUWE1-201ENST00000218328 MYT1LQ9UL68 1186 aa25.46■■□□□ 1.67
HUWE1-201ENST00000218328 RTL5Q5HYW3 569 aaPredicted RBP25.38■■□□□ 1.65
HUWE1-201ENST00000218328 GTF3C3Q9Y5Q9 886 aa25.27■■□□□ 1.64
HUWE1-201ENST00000218328 ZNF316A6NFI3 1004 aaPredicted RBP25.26■■□□□ 1.63
HUWE1-201ENST00000218328 CLSPNQ9HAW4 1339 aa25.21■■□□□ 1.63
HUWE1-201ENST00000218328 FAM50AQ14320 339 aaKnown RBP25.21■■□□□ 1.63
HUWE1-201ENST00000218328 BCANQ96GW7 911 aa25.15■■□□□ 1.62
HUWE1-201ENST00000218328 SLC4A1APQ9BWU0 796 aaKnown RBP25.14■■□□□ 1.61
HUWE1-201ENST00000218328 NEUROD1Q13562 356 aa25.12■■□□□ 1.61
HUWE1-201ENST00000218328 TRIM52Q96A61 297 aa25.07■■□□□ 1.6
HUWE1-201ENST00000218328 ANP32CO43423 234 aa25.02■■□□□ 1.6
HUWE1-201ENST00000218328 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
HUWE1-201ENST00000218328 ACIN1Q9UKV3 1341 aaKnown RBP24.91■■□□□ 1.58
HUWE1-201ENST00000218328 ZNF326Q5BKZ1 582 aaKnown RBP24.8■■□□□ 1.56
HUWE1-201ENST00000218328 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
HUWE1-201ENST00000218328 ABCC9O60706 1549 aa24.67■■□□□ 1.54
HUWE1-201ENST00000218328 ZBTB47Q9UFB7 747 aaPredicted RBP24.61■■□□□ 1.53
HUWE1-201ENST00000218328 ANP32AP39687 249 aaKnown RBP24.56■■□□□ 1.52
HUWE1-201ENST00000218328 CANXP27824 592 aaKnown RBP24.56■■□□□ 1.52
HUWE1-201ENST00000218328 CSRNP3Q8WYN3 585 aa24.56■■□□□ 1.52
HUWE1-201ENST00000218328 FKBP8Q14318 412 aa24.45■■□□□ 1.5
HUWE1-201ENST00000218328 P3H3Q8IVL6 736 aa24.45■■□□□ 1.5
HUWE1-201ENST00000218328 NPM2Q86SE8 214 aaKnown RBP24.41■■□□□ 1.5
HUWE1-201ENST00000218328 BCL11AQ9H165 835 aa24.38■■□□□ 1.49
HUWE1-201ENST00000218328 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
HUWE1-201ENST00000218328 FBLN2P98095 1184 aa24.34■■□□□ 1.49
HUWE1-201ENST00000218328 NEFMP07197 916 aa24.32■■□□□ 1.48
HUWE1-201ENST00000218328 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
HUWE1-201ENST00000218328 HNRNPUQ00839 825 aaKnown RBP eCLIP24.27■■□□□ 1.48
HUWE1-201ENST00000218328 TONSLQ96HA7 1378 aa24.27■■□□□ 1.48
HUWE1-201ENST00000218328 SLC24A1O60721 1099 aa24.25■■□□□ 1.47
HUWE1-201ENST00000218328 DDX10Q13206 875 aaKnown RBP24.24■■□□□ 1.47
HUWE1-201ENST00000218328 ZNF777Q9ULD5 760 aaPredicted RBP24.22■■□□□ 1.47
HUWE1-201ENST00000218328 FAM9BQ8IZU0 186 aa24.17■■□□□ 1.46
HUWE1-201ENST00000218328 EIF5BO60841 1220 aaKnown RBP24.15■■□□□ 1.46
HUWE1-201ENST00000218328 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
HUWE1-201ENST00000218328 ANP32BQ92688 251 aaKnown RBP24.09■■□□□ 1.45
HUWE1-201ENST00000218328 UPF2Q9HAU5 1272 aaKnown RBP24.06■■□□□ 1.44
HUWE1-201ENST00000218328 HSP90AA1P07900 732 aaKnown RBP24.05■■□□□ 1.44
HUWE1-201ENST00000218328 CCDC136Q96JN2 1154 aa24.04■■□□□ 1.44
HUWE1-201ENST00000218328 MIER1Q8N108 512 aa24.01■■□□□ 1.43
HUWE1-201ENST00000218328 SALL2Q9Y467 1007 aaPredicted RBP24.01■■□□□ 1.43
HUWE1-201ENST00000218328 NBR1Q14596 966 aa23.99■■□□□ 1.43
HUWE1-201ENST00000218328 TMC1Q8TDI8 760 aa23.97■■□□□ 1.43
HUWE1-201ENST00000218328 MRS2Q9HD23 443 aa23.92■■□□□ 1.42
HUWE1-201ENST00000218328 CHIC2Q9UKJ5 165 aa23.89■■□□□ 1.42
HUWE1-201ENST00000218328 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.89■■□□□ 1.41
HUWE1-201ENST00000218328 CHGAP10645 457 aaKnown RBP23.87■■□□□ 1.41
HUWE1-201ENST00000218328 SCRIBQ14160 1630 aa23.86■■□□□ 1.41
HUWE1-201ENST00000218328 IRX6P78412 446 aaPredicted RBP23.85■■□□□ 1.41
HUWE1-201ENST00000218328 ZCCHC6Q5VYS8 1495 aaKnown RBP23.82■■□□□ 1.4
HUWE1-201ENST00000218328 GLIPR1L2Q4G1C9 344 aa23.81■■□□□ 1.4
HUWE1-201ENST00000218328 WDR43Q15061 677 aaKnown RBP eCLIP23.8■■□□□ 1.4
HUWE1-201ENST00000218328 HIRIP3Q9BW71 556 aaPredicted RBP23.79■■□□□ 1.4
HUWE1-201ENST00000218328 ARXQ96QS3 562 aa23.74■■□□□ 1.39
HUWE1-201ENST00000218328 STAG3Q9UJ98 1225 aa23.72■■□□□ 1.39
HUWE1-201ENST00000218328 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
HUWE1-201ENST00000218328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.72■■□□□ 1.392e-7■■□□□ 11.6
HUWE1-201ENST00000218328 CLIP1P30622 1438 aa23.71■■□□□ 1.39
HUWE1-201ENST00000218328 EIF4G2P78344 907 aaKnown RBP eCLIP23.7■■□□□ 1.38
HUWE1-201ENST00000218328 ESF1Q9H501 851 aaKnown RBP23.69■■□□□ 1.38
HUWE1-201ENST00000218328 MTUS2Q5JR59 1369 aa23.68■■□□□ 1.38
HUWE1-201ENST00000218328 MYO15BQ96JP2 1530 aa23.66■■□□□ 1.38
HUWE1-201ENST00000218328 TSPY4P0CV99 314 aa23.63■■□□□ 1.37
HUWE1-201ENST00000218328 TSPY10P0CW01 314 aa23.63■■□□□ 1.37
HUWE1-201ENST00000218328 DDRGK1Q96HY6 314 aa23.59■■□□□ 1.37
HUWE1-201ENST00000218328 ANP32EQ9BTT0 268 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms